RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 MED8Q96G25 268 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 POLR2J3Q9H1A7 115 aaKnown RBP18.23■□□□□ 0.51
TRA2A-201ENST00000297071 PLSCR3Q9NRY6 295 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 LRFN2Q9ULH4 789 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 NINQ8N4C6 2090 aa18.23■□□□□ 0.51
TRA2A-201ENST00000297071 A0A0B4J293 547 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 SNTNA6NMZ2 147 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 SLC43A1O75387 559 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 TSPAN19P0C672 248 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 FAM157BP0CG42 384 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 NR2F6P10588 404 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 AZGP1P25311 298 aaKnown RBP18.22■□□□□ 0.51
TRA2A-201ENST00000297071 VIPR1P32241 457 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 GPC1P35052 558 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 PRLHRP49683 370 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 ACLYP53396 1101 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 P2RX3P56373 397 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 EFR3AQ14156 821 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.22■□□□□ 0.515e-7■■■□□ 14.6
TRA2A-201ENST00000297071 CCDC58Q4VC31 144 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 SYTL3Q4VX76 610 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 TCTN3Q6NUS6 607 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 USP30Q70CQ3 517 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 CREB3L2Q70SY1 520 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 TMEM173Q86WV6 379 aaPredicted RBP18.22■□□□□ 0.51
TRA2A-201ENST00000297071 OR5P2Q8WZ92 322 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 NEIL2Q969S2 332 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 MARVELD3Q96A59 401 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 RNF31Q96EP0 1072 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 ZNF354BQ96LW1 612 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 ZSCAN5AQ9BUG6 496 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 SGPP1Q9BX95 441 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 EPHX3Q9H6B9 360 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 PPP1R3EQ9H7J1 279 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 MRPL39Q9NYK5 338 aaKnown RBP18.22■□□□□ 0.51
TRA2A-201ENST00000297071 EXOSC1Q9Y3B2 195 aaKnown RBP18.22■□□□□ 0.51
TRA2A-201ENST00000297071 DYRK1BQ9Y463 629 aa18.22■□□□□ 0.51
TRA2A-201ENST00000297071 A8MV72 311 aaPredicted RBP18.21■□□□□ 0.51
TRA2A-201ENST00000297071 C5orf58C9J3I9 102 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 SLC30A4O14863 429 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 ZNF780AO75290 641 aaPredicted RBP18.21■□□□□ 0.51
TRA2A-201ENST00000297071 SLC16A8O95907 504 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 KCNJ5P48544 419 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 CLDN20P56880 219 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 RAB40BQ12829 278 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 TAB1Q15750 504 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 BRAT1Q6PJG6 821 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 CEACAM20Q6UY09 585 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 OTOP2Q7RTS6 562 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 MRGPREQ86SM8 312 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 RNF180Q86T96 592 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 TCEANCQ8N8B7 351 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 GPR32P1Q8NGA4 272 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 CIDECQ96AQ7 238 aaPredicted RBP18.21■□□□□ 0.51
TRA2A-201ENST00000297071 FYTTD1Q96QD9 318 aaKnown RBP18.21■□□□□ 0.51
TRA2A-201ENST00000297071 ZIC5Q96T25 663 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 ACSL6Q9UKU0 697 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 MAFFQ9ULX9 164 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 BOLA1Q9Y3E2 137 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 A0A1W2PRQ8 180 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 SGK494L7N484 410 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 PLD2O14939 933 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 TFECO14948 347 aaPredicted RBP18.21■□□□□ 0.51
TRA2A-201ENST00000297071 ATG13O75143 517 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 PRKAR1AP10644 381 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 GABRA5P31644 462 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 CD70P32970 193 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 GATMP50440 423 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 GAS1P54826 345 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 CDK5Q00535 292 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 PYDC2Q56P42 97 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 LIPKQ5VXJ0 399 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 ADNP2Q6IQ32 1131 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 ZFYVE19Q96K21 471 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 MARVELD1Q9BSK0 173 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 KATNB1Q9BVA0 655 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 CREBZFQ9NS37 354 aa18.21■□□□□ 0.51
TRA2A-201ENST00000297071 TRDV1A0A1B0GX56 115 aa18.2■□□□□ 0.5
TRA2A-201ENST00000297071 SLC10A3P09131 477 aa18.2■□□□□ 0.5
TRA2A-201ENST00000297071 MYL12AP19105 171 aa18.2■□□□□ 0.5
TRA2A-201ENST00000297071 M6PRP20645 277 aa18.2■□□□□ 0.5
TRA2A-201ENST00000297071 GALP22466 123 aa18.2■□□□□ 0.5
TRA2A-201ENST00000297071 TARDBPQ13148 414 aaKnown RBP eCLIP18.2■□□□□ 0.54e-6■■■■□ 19.5
TRA2A-201ENST00000297071 IKZF1Q13422 519 aa18.2■□□□□ 0.5
TRA2A-201ENST00000297071 FAM209AQ5JX71 171 aa18.2■□□□□ 0.5
TRA2A-201ENST00000297071 HENMT1Q5T8I9 393 aaKnown RBP18.2■□□□□ 0.5
TRA2A-201ENST00000297071 TMPRSS11BQ86T26 416 aa18.2■□□□□ 0.5
TRA2A-201ENST00000297071 CHFRQ96EP1 664 aa18.2■□□□□ 0.5
TRA2A-201ENST00000297071 TMEM169Q96HH4 297 aa18.2■□□□□ 0.5
TRA2A-201ENST00000297071 ZNF607Q96SK3 696 aa18.2■□□□□ 0.5
TRA2A-201ENST00000297071 TRIM39Q9HCM9 518 aa18.2■□□□□ 0.5
TRA2A-201ENST00000297071 ING3Q9NXR8 418 aa18.2■□□□□ 0.5
TRA2A-201ENST00000297071 TSPAN11A1L157 253 aa18.19■□□□□ 0.5
TRA2A-201ENST00000297071 PIPSLA2A3N6 862 aa18.19■□□□□ 0.5
TRA2A-201ENST00000297071 ERVH48-1M5A8F1 160 aa18.19■□□□□ 0.5
TRA2A-201ENST00000297071 OR10H3O60404 316 aa18.19■□□□□ 0.5
TRA2A-201ENST00000297071 MMP20O60882 483 aa18.19■□□□□ 0.5
TRA2A-201ENST00000297071 ACP2P11117 423 aa18.19■□□□□ 0.5
TRA2A-201ENST00000297071 SELPP16109 830 aa18.19■□□□□ 0.5
TRA2A-201ENST00000297071 NPPBP16860 134 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms