RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 SMURF1Q9HCE7 757 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 GPR83Q9NYM4 423 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 SEC14L4Q9UDX3 406 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 LY75O60449 1722 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 SIPA1L1O43166 1804 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 CLCA1A8K7I4 914 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 SLC10A3P09131 477 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 NUDT7P0C024 238 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 GADD45AP24522 165 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 HRH2P25021 359 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 SPINT3P49223 89 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 MLLT10P55197 1068 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 SEC13P55735 322 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 EXOC3L2Q2M3D2 409 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 CDKL4Q5MAI5 379 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 ZCCHC12Q6PEW1 402 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 PARGQ86W56 976 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 GOLM1Q8NBJ4 401 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 GALNT11Q8NCW6 608 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 NUS1Q96E22 293 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 GPER1Q99527 375 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 EFCAB11Q9BUY7 163 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 RC3H2Q9HBD1 1191 aaKnown RBP12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF639Q9UID6 485 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 FXYD1O00168 92 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 WWP2O00308 870 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 AQP9O43315 295 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 EEF1E1O43324 174 aaKnown RBP12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 SRPRAP08240 638 aaKnown RBP12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 RNF144AP50876 292 aaPredicted RBP12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 RAB8AP61006 207 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 SPATS1Q496A3 300 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 SPIN4Q56A73 249 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 ELP2Q6IA86 826 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 C22orf42Q6IC83 251 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 KIAA1324Q6UXG2 1013 aaKnown RBP12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 NOXA1Q86UR1 476 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 KLHL36Q8N4N3 616 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 OR4C6Q8NH72 309 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 CXorf40BQ96DE9 158 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 TRIM2Q9C040 744 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 C3orf14Q9HBI5 128 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 CKLFQ9UBR5 152 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 MGAT4AQ9UM21 535 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 C13orf42A0A1B0GVH6 325 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 WRBO00258 174 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 GRK5P34947 590 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 CDKN2CP42773 168 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 CATSPEREQ5SY80 951 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 SBSNQ6UWP8 590 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF767PQ75MW2 155 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 COMMD7Q86VX2 200 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 PAQR7Q86WK9 346 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 PCNPQ8WW12 178 aaKnown RBP12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 RPL3LQ92901 407 aaKnown RBP12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 CNDP2Q96KP4 475 aaKnown RBP12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 C7orf34Q96L11 122 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 HYLS1Q96M11 299 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 ELOVL2Q9NXB9 296 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 TAS2R10Q9NYW0 307 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 UPB1Q9UBR1 384 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF780BQ9Y6R6 833 aa12.01□□□□□ -0.49
SLC6A1-201ENST00000287766 OR10H2O60403 315 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 IL3P08700 152 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 C7P10643 843 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 JUPP14923 745 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 CSF2RAP15509 400 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 CLCN7P51798 805 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 NCBP2P52298 156 aaKnown RBP eCLIP12□□□□□ -0.49
SLC6A1-201ENST00000287766 ARFIP1P53367 373 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 RAB2AP61019 212 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNHIT3Q15649 155 aaPredicted RBP12□□□□□ -0.49
SLC6A1-201ENST00000287766 SLC5A8Q8N695 610 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 CHDHQ8NE62 594 aaPredicted RBP12□□□□□ -0.49
SLC6A1-201ENST00000287766 OR2T35Q8NGX2 323 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 IRF7Q92985 503 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 RDH12Q96NR8 316 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 MCCC1Q96RQ3 725 aaPredicted RBP12□□□□□ -0.49
SLC6A1-201ENST00000287766 KXD1Q9BQD3 176 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 IFT27Q9BW83 186 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 RANBP3Q9H6Z4 567 aaPredicted RBP12□□□□□ -0.49
SLC6A1-201ENST00000287766 HEBP1Q9NRV9 189 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 LHX3Q9UBR4 397 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 KCNK6Q9Y257 313 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 NOP16Q9Y3C1 178 aaKnown RBP12□□□□□ -0.49
SLC6A1-201ENST00000287766 PSMD9O00233 223 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 RP2O75695 350 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 PIGAP37287 484 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 MLLT1Q03111 559 aaPredicted RBP12□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF763Q0D2J5 394 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 FTMTQ8N4E7 242 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 OR9Q2Q8NGE9 314 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 GLYATL1Q969I3 302 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 BRINP2Q9C0B6 783 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 SIAEQ9HAT2 523 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 CREBZFQ9NS37 354 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 POT1Q9NUX5 634 aa12□□□□□ -0.49
SLC6A1-201ENST00000287766 DCAF13Q9NV06 445 aaKnown RBP12□□□□□ -0.49
SLC6A1-201ENST00000287766 TNFRSF10DQ9UBN6 386 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms