RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 POU3F3P20264 500 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-201ENST00000279247 SERPINB1P30740 379 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 TUBA4AP68366 448 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 ABATP80404 500 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 EEF1A2Q05639 463 aaKnown RBP16.97■□□□□ 0.31
CAPN1-201ENST00000279247 SFSWAPQ12872 951 aaKnown RBP16.97■□□□□ 0.31
CAPN1-201ENST00000279247 DEF8Q6ZN54 512 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 FAM46DQ8NEK8 389 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 NEURL3Q96EH8 262 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 C16orf58Q96GQ5 468 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 SLC35G5Q96KT7 338 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 TMEM38AQ9H6F2 299 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 AMBNQ9NP70 447 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 ENTPD4Q9Y227 616 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 LYVE1Q9Y5Y7 322 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 B4DGG1 531 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 HMGN4O00479 90 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 PCDH17O14917 1159 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 P2RX6O15547 441 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 EPS8Q12929 822 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 RAB39AQ14964 217 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 ZIC1Q15915 447 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 DEFB110Q30KQ9 67 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 FBXO43Q4G163 708 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 SAXO2Q658L1 398 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 KDM4DQ6B0I6 523 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 FRMPD2BQ6IN97 320 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 DENND6BQ8NEG7 585 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 OR9A2Q8NGT5 310 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 ZNF300Q96RE9 604 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-201ENST00000279247 WFDC6Q9BQY6 131 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 EPS8L2Q9H6S3 715 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 CXorf21Q9HAI6 301 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 LMAN1LQ9HAT1 526 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 ASB4Q9Y574 426 aa16.97■□□□□ 0.31
CAPN1-201ENST00000279247 MAN2B1O00754 1011 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 CRHBPP24387 322 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 ISL1P61371 349 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 SIM1P81133 766 aaPredicted RBP16.96■□□□□ 0.31
CAPN1-201ENST00000279247 RBBP4Q09028 425 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 FGD3Q5JSP0 725 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 ZNF425Q6IV72 752 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 FBXO42Q6P3S6 717 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 B3GNT6Q6ZMB0 384 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 NLGN4XQ8N0W4 816 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 TAGAPQ8N103 731 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 LGI4Q8N135 537 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 GIPC3Q8TF64 312 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 MIR1-1HGQ9H1L0 117 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 TMEM74BQ9NUR3 256 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 HRASLS2Q9NWW9 162 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 ACTR10Q9NZ32 417 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 CPNE7Q9UBL6 633 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 PCDHGB3Q9Y5G1 929 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 SEC16AO15027 2179 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 TNFP01375 233 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 FESP07332 822 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 IDH2P48735 452 aaKnown RBP16.96■□□□□ 0.31
CAPN1-201ENST00000279247 HLCSP50747 726 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 TMEM35AQ53FP2 167 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 ZNF691Q5VV52 312 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 PRSS41Q7RTY9 318 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 MFSD9Q8NBP5 474 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 OR10G2Q8NGC3 310 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 UTP15Q8TED0 518 aaKnown RBP16.96■□□□□ 0.31
CAPN1-201ENST00000279247 SLC37A2Q8TED4 501 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 SLC6A18Q96N87 628 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 OR2A14Q96R47 310 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 NIPSNAP1Q9BPW8 284 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 RAD21L1Q9H4I0 556 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 COMMD3-BMI1R4GMX3 469 aa16.96■□□□□ 0.31
CAPN1-201ENST00000279247 STK25O00506 426 aa16.96■□□□□ 0.3
CAPN1-201ENST00000279247 ANGPTL1O95841 491 aa16.96■□□□□ 0.3
CAPN1-201ENST00000279247 HMGN2P05204 90 aaKnown RBP16.96■□□□□ 0.3
CAPN1-201ENST00000279247 MATN1P21941 496 aa16.96■□□□□ 0.3
CAPN1-201ENST00000279247 NDUFS1P28331 727 aa16.96■□□□□ 0.3
CAPN1-201ENST00000279247 MC3RP41968 323 aa16.96■□□□□ 0.3
CAPN1-201ENST00000279247 LAIR2Q6ISS4 152 aa16.96■□□□□ 0.3
CAPN1-201ENST00000279247 CCDC81Q6ZN84 652 aa16.96■□□□□ 0.3
CAPN1-201ENST00000279247 ASPGQ86U10 573 aa16.96■□□□□ 0.3
CAPN1-201ENST00000279247 PAQR7Q86WK9 346 aa16.96■□□□□ 0.3
CAPN1-201ENST00000279247 TSTD1Q8NFU3 115 aa16.96■□□□□ 0.3
CAPN1-201ENST00000279247 DNASE1L2Q92874 299 aa16.96■□□□□ 0.3
CAPN1-201ENST00000279247 RDH12Q96NR8 316 aa16.96■□□□□ 0.3
CAPN1-201ENST00000279247 RSPO3Q9BXY4 272 aaPredicted RBP16.96■□□□□ 0.3
CAPN1-201ENST00000279247 FOXQ1Q9C009 403 aa16.96■□□□□ 0.3
CAPN1-201ENST00000279247 PITHD1Q9GZP4 211 aaPredicted RBP16.96■□□□□ 0.3
CAPN1-201ENST00000279247 EPB41L1Q9H4G0 881 aa16.96■□□□□ 0.3
CAPN1-201ENST00000279247 SEC14L3Q9UDX4 400 aa16.96■□□□□ 0.3
CAPN1-201ENST00000279247 PADI2Q9Y2J8 665 aa16.96■□□□□ 0.3
CAPN1-201ENST00000279247 SLC35G6P0C7Q6 338 aa16.95■□□□□ 0.3
CAPN1-201ENST00000279247 POU1F1P28069 291 aa16.95■□□□□ 0.3
CAPN1-201ENST00000279247 AHRP35869 848 aa16.95■□□□□ 0.3
CAPN1-201ENST00000279247 STXBP1P61764 594 aaKnown RBP16.95■□□□□ 0.3
CAPN1-201ENST00000279247 BIRC2Q13490 618 aa16.95■□□□□ 0.3
CAPN1-201ENST00000279247 GAS6Q14393 721 aa16.95■□□□□ 0.3
CAPN1-201ENST00000279247 FIGLAQ6QHK4 219 aa16.95■□□□□ 0.3
CAPN1-201ENST00000279247 GALNT15Q8N3T1 639 aa16.95■□□□□ 0.3
CAPN1-201ENST00000279247 SIMC1Q8NDZ2 872 aa16.95■□□□□ 0.3
CAPN1-201ENST00000279247 WARS2Q9UGM6 360 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms