RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 LHX3Q9UBR4 397 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 CEP290O15078 2479 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 HYKKA2RU49 373 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 ZNF879B4DU55 563 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 XPNPEP2O43895 674 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 GJB3O75712 270 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 ARHGEF15O94989 841 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 ATXN1LP0C7T5 689 aaKnown RBP10.77□□□□□ -0.69
USP6NL-201ENST00000277575 GJA8P48165 433 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 STARP49675 285 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 CDK3Q00526 305 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 ARFRP1Q13795 201 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 DSG2Q14126 1118 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 GTDC1Q4AE62 458 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 SLC36A4Q6YBV0 504 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 SPATC1Q76KD6 591 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 PDZD3Q86UT5 571 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 ERI1Q8IV48 349 aaKnown RBP10.77□□□□□ -0.69
USP6NL-201ENST00000277575 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.77□□□□□ -0.69
USP6NL-201ENST00000277575 OR52N2Q8NGI0 321 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 OR51G2Q8NGK0 314 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 NEIL2Q969S2 332 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 NT5C3BQ969T7 300 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 TMEM80Q96HE8 168 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 MED28Q9H204 178 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 PELI2Q9HAT8 420 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 IFT46Q9NQC8 304 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 KLHL42Q9P2K6 505 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 ZFR2Q9UPR6 939 aaKnown RBP10.77□□□□□ -0.69
USP6NL-201ENST00000277575 ARID1BQ8NFD5 2236 aaPredicted RBP10.77□□□□□ -0.69
USP6NL-201ENST00000277575 GLI3P10071 1580 aa10.77□□□□□ -0.69
USP6NL-201ENST00000277575 NHSL1Q5SYE7 1610 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 ANHXE9PGG2 379 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 NME4O00746 187 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 AK1P00568 194 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 ENDOUP21128 410 aaKnown RBP10.76□□□□□ -0.69
USP6NL-201ENST00000277575 CLCN2P51788 898 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 EXOC3L2Q2M3D2 409 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 MEDAGQ5VYS4 303 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 FAM180BQ6P0A1 224 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 MSANTD1Q6ZTZ1 278 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 CNTN4Q8IWV2 1026 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.76□□□□□ -0.69
USP6NL-201ENST00000277575 GOLM1Q8NBJ4 401 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 EZH1Q92800 747 aaPredicted RBP10.76□□□□□ -0.69
USP6NL-201ENST00000277575 B3GNT4Q9C0J1 378 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 PLCL2Q9UPR0 1127 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 ENTPD2Q9Y5L3 495 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 C2orf92A0A1B0GVN3 265 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 A0A1B0GVT2 93 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 H0YAE9 185 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 RNF13O43567 381 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 RNF144AP50876 292 aaPredicted RBP10.76□□□□□ -0.69
USP6NL-201ENST00000277575 RPS3AP61247 264 aaKnown RBP10.76□□□□□ -0.69
USP6NL-201ENST00000277575 CSTF1Q05048 431 aaKnown RBP10.76□□□□□ -0.69
USP6NL-201ENST00000277575 RCAN2Q14206 197 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 NSDHLQ15738 373 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 ZFP69Q49AA0 526 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 C1orf189Q5VU69 101 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 CWF19L1Q69YN2 538 aaKnown RBP10.76□□□□□ -0.69
USP6NL-201ENST00000277575 TMEM225Q6GV28 225 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 TCEAL6Q6IPX3 200 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 ZNF784Q8NCA9 323 aaPredicted RBP10.76□□□□□ -0.69
USP6NL-201ENST00000277575 ECHDC3Q96DC8 303 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 TMEM19Q96HH6 336 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 LDAHQ9H6V9 325 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 FTSJ1Q9UET6 329 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 HS3ST2Q9Y278 367 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 MAU2Q9Y6X3 613 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 A0A1W2PRG6 482 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 TCRBV5S1A1TA0A578 114 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 PPP6CO00743 305 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 ORC5O43913 435 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 RHCEP18577 417 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 OR3A3P47888 321 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 OR3A2P47893 321 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 PDX1P52945 283 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 ST3GAL4Q11206 333 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 LRP8Q14114 963 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 SLC36A3Q495N2 470 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 PNCKQ6P2M8 343 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 GPAT4Q86UL3 456 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 C7orf57Q8NEG2 295 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 RLN3Q8WXF3 142 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 KHSRPQ92945 711 aaKnown RBP eCLIP10.76□□□□□ -0.697e-7■■□□□ 14.1
USP6NL-201ENST00000277575 MYRFLQ96LU7 910 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 ZBTB20Q9HC78 741 aaPredicted RBP10.76□□□□□ -0.69
USP6NL-201ENST00000277575 DKKL1Q9UK85 242 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 ADAMTS6Q9UKP5 1117 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 SCN9AQ15858 1988 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.76□□□□□ -0.69
USP6NL-201ENST00000277575 C11orf98E9PRG8 122 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 WRBO00258 174 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 AK4P27144 223 aaPredicted RBP10.76□□□□□ -0.69
USP6NL-201ENST00000277575 MGAT3Q09327 533 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 CHAF1BQ13112 559 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 PMS2P3Q13401 168 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 C6orf141Q5SZD1 244 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 VTCN1Q7Z7D3 282 aa10.76□□□□□ -0.69
USP6NL-201ENST00000277575 JAGN1Q8N5M9 183 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms