RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 TMEM44Q2T9K0 475 aa19.5■□□□□ 0.71
CACNA1B-201ENST00000277549 SPANXN4Q5MJ08 99 aa19.5■□□□□ 0.71
CACNA1B-201ENST00000277549 HOXB13Q92826 284 aaPredicted RBP19.5■□□□□ 0.71
CACNA1B-201ENST00000277549 CBSLP0DN79 551 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 CBSP35520 551 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 POC1BQ8TC44 478 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 IGSF21Q96ID5 467 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 A0A0G2JPF8 293 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 HNRNPCL3B7ZW38 293 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 MAN2B1O00754 1011 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 ABCB7O75027 752 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 HNRNPCL4P0DMR1 293 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 GBX1Q14549 363 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 FXNQ16595 210 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 C12orf43Q96C57 262 aaKnown RBP19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 SSTP61278 116 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 ZNF423Q2M1K9 1284 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 LEG1Q6P5S2 330 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 LMF1Q96S06 567 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 DPH7Q9BTV6 452 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 F5H5K5 113 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 TMEM225BP0DP42 221 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 ZNF773Q6PK81 442 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 ZFP41Q8N8Y5 198 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 SUN5Q8TC36 379 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 MROQ9BYG7 248 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 ZBTB26Q9HCK0 441 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 SIM1P81133 766 aaPredicted RBP19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 TMEM236Q5W0B7 351 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 TXNRD3NBQ6F5E7 133 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 TMPRSS12Q86WS5 348 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 TWNKQ96RR1 684 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 SERTAD4Q9NUC0 356 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 DZANK1Q9NVP4 752 aa19.49■□□□□ 0.71
CACNA1B-201ENST00000277549 STK17BO94768 372 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 ZNF28P17035 718 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 CKMT2P17540 419 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 ACADVLP49748 655 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 NTRK2Q16620 822 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 ACSBG2Q5FVE4 666 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 SHQ1Q6PI26 577 aaKnown RBP19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 ZNF431Q8TF32 576 aaPredicted RBP19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 OR52B2Q96RD2 323 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 ARHGAP23Q9P227 1491 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 ZNF225Q9UK10 706 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 PTAFRP25105 342 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 STOMP27105 288 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 PGGT1BP53609 377 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 CLDN2P57739 230 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 RHDQ02161 417 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 ITPAQ9BY32 194 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 SLC16A8O95907 504 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 GLDCP23378 1020 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 C6orf183Q5T699 404 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 GNB4Q9HAV0 340 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 GCM1Q9NP62 436 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 CD207Q9UJ71 328 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 THBS2P35442 1172 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 DMWDQ09019 674 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 GLT8D1Q68CQ7 371 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 SHFQ7M4L6 423 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 OSTF1Q92882 214 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 ZNF775Q96BV0 537 aaPredicted RBP19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 POLE4Q9NR33 117 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 VSX1Q9NZR4 365 aaPredicted RBP19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 ZXDBP98169 803 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 DSC1Q08554 894 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 OR2T5Q6IEZ7 315 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 OR2T29Q8NH02 315 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 IL23AQ9NPF7 189 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 ZNF821O75541 412 aaPredicted RBP19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 AHSGP02765 367 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 LCATP04180 440 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 NR4A2P43354 598 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 C18orf21Q32NC0 220 aaPredicted RBP19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 OR5M10Q6IEU7 315 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 OR52E2Q8NGJ4 325 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 RLN3Q8WXF3 142 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 CGREF1Q99674 301 aa19.48■□□□□ 0.71
CACNA1B-201ENST00000277549 K7ERQ8 282 aa19.47■□□□□ 0.71
CACNA1B-201ENST00000277549 PNMTP11086 282 aa19.47■□□□□ 0.71
CACNA1B-201ENST00000277549 AGXT2Q9BYV1 514 aa19.47■□□□□ 0.71
CACNA1B-201ENST00000277549 TM9SF3Q9HD45 589 aa19.47■□□□□ 0.71
CACNA1B-201ENST00000277549 PISDQ9UG56 409 aa19.47■□□□□ 0.71
CACNA1B-201ENST00000277549 EEF1E1-BLOC1S5C9J1V9 151 aa19.47■□□□□ 0.71
CACNA1B-201ENST00000277549 EEF1E1O43324 174 aaKnown RBP19.47■□□□□ 0.71
CACNA1B-201ENST00000277549 LYPLA2O95372 231 aa19.47■□□□□ 0.71
CACNA1B-201ENST00000277549 CREB1P16220 341 aa19.47■□□□□ 0.71
CACNA1B-201ENST00000277549 PHC1P78364 1004 aa19.47■□□□□ 0.71
CACNA1B-201ENST00000277549 PIGFQ07326 219 aa19.47■□□□□ 0.71
CACNA1B-201ENST00000277549 TMEM201Q5SNT2 666 aa19.47■□□□□ 0.71
CACNA1B-201ENST00000277549 CARM1Q86X55 608 aa19.47■□□□□ 0.71
CACNA1B-201ENST00000277549 COPZ2Q9P299 210 aa19.47■□□□□ 0.71
CACNA1B-201ENST00000277549 CST6Q15828 149 aa19.47■□□□□ 0.71
CACNA1B-201ENST00000277549 SYT14Q8NB59 555 aa19.47■□□□□ 0.71
CACNA1B-201ENST00000277549 FAM71F1Q96KD3 344 aaPredicted RBP19.47■□□□□ 0.71
CACNA1B-201ENST00000277549 MYRFLQ96LU7 910 aa19.47■□□□□ 0.71
CACNA1B-201ENST00000277549 POT1Q9NUX5 634 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms