RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 FAM46DQ8NEK8 389 aa15.96■□□□□ 0.15
SQLE-201ENST00000265896 LRR1Q96L50 414 aa15.96■□□□□ 0.15
SQLE-201ENST00000265896 DEPDC7Q96QD5 511 aa15.96■□□□□ 0.15
SQLE-201ENST00000265896 DCLRE1CQ96SD1 692 aaKnown RBP15.96■□□□□ 0.15
SQLE-201ENST00000265896 UCK2Q9BZX2 261 aa15.96■□□□□ 0.15
SQLE-201ENST00000265896 HMX1Q9NP08 348 aaPredicted RBP15.96■□□□□ 0.15
SQLE-201ENST00000265896 TEX10Q9NXF1 929 aaPredicted RBP15.96■□□□□ 0.15
SQLE-201ENST00000265896 PLXNB3Q9ULL4 1909 aa15.96■□□□□ 0.15
SQLE-201ENST00000265896 GSAPA4D1B5 854 aa15.96■□□□□ 0.14
SQLE-201ENST00000265896 MYL12BO14950 172 aa15.96■□□□□ 0.14
SQLE-201ENST00000265896 PSMA1P25786 263 aaKnown RBP15.96■□□□□ 0.14
SQLE-201ENST00000265896 POLR2LP62875 67 aaKnown RBP15.96■□□□□ 0.14
SQLE-201ENST00000265896 EEF1A2Q05639 463 aaKnown RBP15.96■□□□□ 0.14
SQLE-201ENST00000265896 PYDC2Q56P42 97 aa15.96■□□□□ 0.14
SQLE-201ENST00000265896 ZNF367Q7RTV3 350 aa15.96■□□□□ 0.14
SQLE-201ENST00000265896 OR56A3Q8NH54 315 aa15.96■□□□□ 0.14
SQLE-201ENST00000265896 CHAC2Q8WUX2 184 aa15.96■□□□□ 0.14
SQLE-201ENST00000265896 ZNF558Q96NG5 402 aa15.96■□□□□ 0.14
SQLE-201ENST00000265896 SPATA7Q9P0W8 599 aa15.96■□□□□ 0.14
SQLE-201ENST00000265896 SEC14L3Q9UDX4 400 aa15.96■□□□□ 0.14
SQLE-201ENST00000265896 ANGPT4Q9Y264 503 aa15.96■□□□□ 0.14
SQLE-201ENST00000265896 V9GYH0 126 aa15.96■□□□□ 0.14
SQLE-201ENST00000265896 ERAL1O75616 437 aaKnown RBP15.95■□□□□ 0.14
SQLE-201ENST00000265896 C1GALT1C1LP0DN25 315 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 ITGA2P17301 1181 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 ELAVL4P26378 380 aaKnown RBP15.95■□□□□ 0.14
SQLE-201ENST00000265896 CRYBB2P43320 205 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 RAB33AQ14088 237 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 Q5BKY6 102 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 TCEAL5Q5H9L2 206 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 TPGS2Q68CL5 300 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 VN1R5Q7Z5H4 357 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 IQCHQ86VS3 1027 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 LAS2Q8IYD9 372 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 OXR1Q8N573 874 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 SLC9A6Q92581 669 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 DEFB118Q96PH6 123 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 PLA2G12AQ9BZM1 189 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 RETREG1Q9H6L5 497 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 NTNG1Q9Y2I2 539 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 SLC5A10A0PJK1 596 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 MEIOCA2RUB1 952 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 HOXA2O43364 376 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 APEX1P27695 318 aaKnown RBP15.95■□□□□ 0.14
SQLE-201ENST00000265896 BUD31P41223 144 aaPredicted RBP15.95■□□□□ 0.14
SQLE-201ENST00000265896 MAPK12P53778 367 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 RPS25P62851 125 aaKnown RBP15.95■□□□□ 0.14
SQLE-201ENST00000265896 CSNK2BP67870 215 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 OLR1P78380 273 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 RUNX1T1Q06455 604 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 REEP3Q6NUK4 255 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 GALNT12Q8IXK2 581 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.95■□□□□ 0.146e-13■■■■□ 21.3
SQLE-201ENST00000265896 SLC5A11Q8WWX8 675 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 BHLHE41Q9C0J9 482 aaPredicted RBP15.95■□□□□ 0.14
SQLE-201ENST00000265896 NXF2Q9GZY0 626 aaKnown RBP15.95■□□□□ 0.14
SQLE-201ENST00000265896 C11orf54Q9H0W9 315 aaPredicted RBP15.95■□□□□ 0.14
SQLE-201ENST00000265896 DYRK4Q9NR20 520 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 CNIH4Q9P003 139 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 CCDC59Q9P031 241 aaKnown RBP15.95■□□□□ 0.14
SQLE-201ENST00000265896 CFAP54Q96N23 3096 aa15.95■□□□□ 0.14
SQLE-201ENST00000265896 PRR23AA6NEV1 266 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 NPIPB8E9PQR5 432 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 PLPP1O14494 284 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 HOXC11O43248 304 aaPredicted RBP15.94■□□□□ 0.14
SQLE-201ENST00000265896 HOXB3P14651 431 aaPredicted RBP15.94■□□□□ 0.14
SQLE-201ENST00000265896 PPIBP23284 216 aaKnown RBP15.94■□□□□ 0.14
SQLE-201ENST00000265896 FBXO43Q4G163 708 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 FAM71E1Q6IPT2 247 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 PARS2Q7L3T8 475 aaKnown RBP15.94■□□□□ 0.14
SQLE-201ENST00000265896 C6orf120Q7Z4R8 191 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 MMAAQ8IVH4 418 aaKnown RBP15.94■□□□□ 0.14
SQLE-201ENST00000265896 UBQLNLQ8IYU4 475 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 ZSWIM3Q96MP5 696 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 TRMT61BQ9BVS5 477 aaKnown RBP15.94■□□□□ 0.14
SQLE-201ENST00000265896 HDHD5Q9BXW7 423 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 XKR8Q9H6D3 395 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 TBC1D17Q9HA65 648 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 REV1Q9UBZ9 1251 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 MKLN1Q9UL63 735 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 CORO2BQ9UQ03 480 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 SCN2AQ99250 2005 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 PRAMEF27A3QJZ7 478 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 ANKRD34BA5PLL1 514 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 FABP12A6NFH5 140 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 POP7O75817 140 aaKnown RBP15.94■□□□□ 0.14
SQLE-201ENST00000265896 TSPAN19P0C672 248 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 RHCEP18577 417 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 CD72P21854 359 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 DGKGP49619 791 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 CDKL4Q5MAI5 379 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 LYPD8Q6UX82 237 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 LIPIQ6XZB0 460 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 GHDCQ8N2G8 530 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 TP53I13Q8NBR0 393 aaPredicted RBP15.94■□□□□ 0.14
SQLE-201ENST00000265896 ATP6V1C2Q8NEY4 427 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 JPH3Q8WXH2 748 aaPredicted RBP15.94■□□□□ 0.14
SQLE-201ENST00000265896 KLHL6Q8WZ60 621 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 TP53INP1Q96A56 240 aa15.94■□□□□ 0.14
SQLE-201ENST00000265896 ZG16BQ96DA0 208 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms