RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 NUBPLQ8TB37 319 aa11.32□□□□□ -0.6
TRAF4-202ENST00000262396 DOK4Q8TEW6 326 aa11.32□□□□□ -0.6
TRAF4-202ENST00000262396 ZNF721Q8TF20 911 aa11.32□□□□□ -0.6
TRAF4-202ENST00000262396 KCTD4Q8WVF5 259 aa11.32□□□□□ -0.6
TRAF4-202ENST00000262396 RIT1Q92963 219 aa11.32□□□□□ -0.6
TRAF4-202ENST00000262396 ANKRD9Q96BM1 317 aaPredicted RBP11.32□□□□□ -0.6
TRAF4-202ENST00000262396 NXNL1Q96CM4 212 aa11.32□□□□□ -0.6
TRAF4-202ENST00000262396 UBXN10Q96LJ8 280 aa11.32□□□□□ -0.6
TRAF4-202ENST00000262396 DOHHQ9BU89 302 aa11.32□□□□□ -0.6
TRAF4-202ENST00000262396 SORBS1Q9BX66 1292 aaKnown RBP11.32□□□□□ -0.6
TRAF4-202ENST00000262396 ERVK-6Q9BXR3 956 aa11.32□□□□□ -0.6
TRAF4-202ENST00000262396 VPS11Q9H270 941 aa11.32□□□□□ -0.6
TRAF4-202ENST00000262396 ZDHHC11Q9H8X9 412 aa11.32□□□□□ -0.6
TRAF4-202ENST00000262396 TUBA8Q9NY65 449 aaPredicted RBP11.32□□□□□ -0.6
TRAF4-202ENST00000262396 TNFRSF10DQ9UBN6 386 aa11.32□□□□□ -0.6
TRAF4-202ENST00000262396 ERVK-19Q9WJR5 959 aa11.32□□□□□ -0.6
TRAF4-202ENST00000262396 TNPO3Q9Y5L0 923 aaKnown RBP11.32□□□□□ -0.6
TRAF4-202ENST00000262396 IKBKGQ9Y6K9 419 aa11.32□□□□□ -0.6
TRAF4-202ENST00000262396 C15orf38-AP3S2A0A0A6YYH1 394 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 GLOD5A6NK44 160 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 AQP7O14520 342 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 TP53I11O14683 189 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 SUSD5O60279 629 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 HCN1O60741 890 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 PRAMEF4O60810 478 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 TRAPPC6AO75865 159 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 HOXD4P09016 255 aaPredicted RBP11.31□□□□□ -0.6
TRAF4-202ENST00000262396 SLC35E2BP0CK96 405 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 NR2F6P10588 404 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 GDF1P27539 372 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 TYK2P29597 1187 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 PIK3CBP42338 1070 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 TRPC1P48995 793 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 NRG3P56975 720 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 GPX6P59796 221 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 KRTAP10-9P60411 292 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 PRAMEF9Q5VWM5 478 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 C18orf63Q68DL7 685 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 TAOK1Q7L7X3 1001 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 UBE3DQ7Z6J8 389 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 ISCA2Q86U28 154 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 ST13P4Q8IZP2 240 aaPredicted RBP11.31□□□□□ -0.6
TRAF4-202ENST00000262396 RNF175Q8N4F7 328 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 RPRMLQ8N4K4 120 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 DIO2Q92813 273 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 SPACA9Q96E40 222 aaPredicted RBP11.31□□□□□ -0.6
TRAF4-202ENST00000262396 FBXL20Q96IG2 436 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 TTYH2Q9BSA4 534 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 MCMBPQ9BTE3 642 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 ZFP64Q9NPA5 681 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 DMRT3Q9NQL9 472 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 PLSCR2Q9NRY7 297 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 AHSPQ9NZD4 102 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 CNIH4Q9P003 139 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 EDARQ9UNE0 448 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 ATG4BQ9Y4P1 393 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 CLDN16Q9Y5I7 305 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 LIPGQ9Y5X9 500 aa11.31□□□□□ -0.6
TRAF4-202ENST00000262396 C2orf92A0A1B0GVN3 265 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 PLPP1O14494 284 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 TP73O15350 636 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 GLSO94925 669 aaPredicted RBP11.3□□□□□ -0.6
TRAF4-202ENST00000262396 WISP3O95389 354 aaPredicted RBP11.3□□□□□ -0.6
TRAF4-202ENST00000262396 GPR75O95800 540 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 TBX6O95947 436 aaPredicted RBP11.3□□□□□ -0.6
TRAF4-202ENST00000262396 FAM58BPP0C7Q3 252 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 PIK3R1P27986 724 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 MSX1P28360 303 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 GCKP35557 465 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 DEKP35659 375 aaKnown RBP11.3□□□□□ -0.6
TRAF4-202ENST00000262396 GMPRP36959 345 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 TMED10P49755 219 aaKnown RBP11.3□□□□□ -0.6
TRAF4-202ENST00000262396 SERPINB8P50452 374 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 CCNG1P51959 295 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 ALDH18A1P54886 795 aaKnown RBP11.3□□□□□ -0.6
TRAF4-202ENST00000262396 IFT88Q13099 833 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 GTF2H2Q13888 395 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 ACAP2Q15057 778 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 SF3B4Q15427 424 aaKnown RBP eCLIP11.3□□□□□ -0.65e-7■■■□□ 18.5
TRAF4-202ENST00000262396 GTF2H2CQ6P1K8 395 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 NUDT13Q86X67 352 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 ZCCHC7Q8N3Z6 543 aaKnown RBP11.3□□□□□ -0.6
TRAF4-202ENST00000262396 FBXO25Q8TCJ0 367 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 UBTD2Q8WUN7 234 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 ZNF597Q96LX8 424 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 ATOH8Q96SQ7 321 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 IPPKQ9H8X2 491 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 KCNN3Q9UGI6 736 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 PYCARDQ9ULZ3 195 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 HRH3Q9Y5N1 445 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 CSMD1Q96PZ7 3565 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 GTF3C1Q12789 2109 aa11.3□□□□□ -0.6
TRAF4-202ENST00000262396 APCP25054 2843 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 A0A096LPK6 155 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 CCDC189A1A4V9 331 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 OR6C76A6NM76 312 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 SMIM24O75264 130 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 GUCY1B2O75343 617 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 PRKRAO75569 313 aaKnown RBP11.29□□□□□ -0.6
TRAF4-202ENST00000262396 TOXO94900 526 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms