RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 TYW3Q6IPR3 259 aaKnown RBP13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 WASH2PQ6VEQ5 465 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 ZNF517Q6ZMY9 492 aaPredicted RBP13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 USP30Q70CQ3 517 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 ADCK2Q7Z695 626 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 METTL3Q86U44 580 aaKnown RBP13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 C1GALT1C1Q96EU7 318 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 C11orf24Q96F05 449 aaPredicted RBP13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 TRMT61AQ96FX7 289 aaKnown RBP13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 DEPDC7Q96QD5 511 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 SEMA3GQ9NS98 782 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 YARS2Q9Y2Z4 477 aaKnown RBP13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 UGT2A1Q9Y4X1 527 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 KLK4Q9Y5K2 254 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 SNX11Q9Y5W9 270 aa13.77□□□□□ -0.21
SFSWAP-201ENST00000261674 NOTCH4Q99466 2003 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 K7ESM1 405 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 PLD2O14939 933 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 MOSPD3O75425 235 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 C1GALT1C1LP0DN25 315 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 METAP1P53582 386 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 ERVK-21P61565 698 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 UBE3AQ05086 875 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 ZNF630Q2M218 657 aaPredicted RBP13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 C22orf42Q6IC83 251 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 SHFQ7M4L6 423 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 SFTPA1Q8IWL2 248 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 TDHQ8IZJ6 230 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 HORMAD2Q8N7B1 307 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 ZFP41Q8N8Y5 198 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 KLHL6Q8WZ60 621 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 PIK3R3Q92569 461 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 VOPP1Q96AW1 172 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 DIRAS2Q96HU8 199 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 FCRL1Q96LA6 429 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 OPALINQ96PE5 141 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 SDHCQ99643 169 aaPredicted RBP13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 MAPKAP1Q9BPZ7 522 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 WFDC6Q9BQY6 131 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 RPP25Q9BUL9 199 aaKnown RBP13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 UCK2Q9BZX2 261 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 ZNF576Q9H609 170 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 HHATLQ9HCP6 504 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 CCDC59Q9P031 241 aaKnown RBP13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 CENPXA8MT69 81 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 FFAR1O14842 300 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 CYP17A1P05093 508 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 HSD3B1P14060 373 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 TIMP2P16035 220 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 RHCEP18577 417 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 POLR2EP19388 210 aaKnown RBP13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 HSD3B2P26439 372 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 TIE1P35590 1138 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 EIF4HQ15056 248 aaKnown RBP13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 ATAD3CQ5T2N8 411 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 ZDHHC20Q5W0Z9 365 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 REEP3Q6NUK4 255 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 OTULINQ96BN8 352 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 TMEM19Q96HH6 336 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 F2RL3Q96RI0 385 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 TSSK6Q9BXA6 273 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 BARHL1Q9BZE3 327 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 KCNK12Q9HB15 430 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 DMRT3Q9NQL9 472 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 TDP1Q9NUW8 608 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 SEC14L3Q9UDX4 400 aa13.76□□□□□ -0.21
SFSWAP-201ENST00000261674 A0A1W2PQ09 198 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 FAM47E-STBD1D6RA91 191 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 SLC28A2O43868 658 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 CBLP22681 906 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 KCNC3Q14003 757 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 TBRG1Q3YBR2 411 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 RAET1GQ6H3X3 334 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 ATCAYQ86WG3 371 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 RAB43Q86YS6 212 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 OR56A3Q8NH54 315 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 C9orf43Q8TAL5 461 aaPredicted RBP13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 SLC38A5Q8WUX1 472 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 ZNF707Q96C28 371 aaPredicted RBP13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 REPS1Q96D71 796 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 PHOX2BQ99453 314 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 SPATA9Q9BWV2 254 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 GULP1Q9UBP9 304 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 SSR3Q9UNL2 185 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 SPIN1Q9Y657 262 aaPredicted RBP13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 GLOD5A6NK44 160 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 C1orf105O95561 183 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 CD72P21854 359 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 GSTM5P46439 218 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 RORCP51449 518 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 NFE2L1Q14494 772 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 BCL2A1Q16548 175 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 PDZK1Q5T2W1 519 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 CCDC190Q86UF4 302 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 ZSCAN5AQ9BUG6 496 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 PRR14Q9BWN1 585 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 NOX1Q9Y5S8 564 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 ANAPC1Q9H1A4 1944 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 FEZF1A0PJY2 475 aa13.75□□□□□ -0.21
SFSWAP-201ENST00000261674 M0R3H8 397 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms