RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 TPSD1Q9BZJ3 242 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 LRRN3Q9H3W5 708 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 ABCG2Q9UNQ0 655 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 CDH10Q9Y6N8 788 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 SDHDO14521 159 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 S1PR4O95977 384 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 CD40LGP29965 261 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 VIPR2P41587 438 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 GJA8P48165 433 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 OR4C11Q6IEV9 310 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 SHQ1Q6PI26 577 aaKnown RBP11.59□□□□□ -0.55
COL8A1-201ENST00000261037 VTCN1Q7Z7D3 282 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 TSPAN33Q86UF1 283 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 CSNK1A1LQ8N752 337 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 ZFP41Q8N8Y5 198 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 ADAMTS10Q9H324 1103 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 SEC14L5O43304 696 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 EMC8O43402 210 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 EPCAMP16422 314 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 S1PR1P21453 382 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 TUBA1BP68363 451 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 TUBA4AP68366 448 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 CRYZQ08257 329 aaKnown RBP11.59□□□□□ -0.55
COL8A1-201ENST00000261037 MAB21L1Q13394 359 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 ENPP6Q6UWR7 440 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 TUBA1AQ71U36 451 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 GID4Q8IVV7 300 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 LRRC25Q8N386 305 aaPredicted RBP11.59□□□□□ -0.55
COL8A1-201ENST00000261037 SHISA4Q96DD7 197 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 SLC25A44Q96H78 314 aaPredicted RBP11.59□□□□□ -0.55
COL8A1-201ENST00000261037 CCDC86Q9H6F5 360 aaKnown RBP11.59□□□□□ -0.55
COL8A1-201ENST00000261037 PRODH2Q9UF12 536 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 GLS2Q9UI32 602 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 STC2O76061 302 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 NPPAP01160 153 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 ALDOAP04075 364 aaKnown RBP11.58□□□□□ -0.56
COL8A1-201ENST00000261037 C6P13671 934 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 CELP19835 753 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 SLC26A5P58743 744 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 CES4AQ5XG92 561 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 FCRLBQ6BAA4 426 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 CEACAM19Q7Z692 300 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 TREML1Q86YW5 311 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 LAS2Q8IYD9 372 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 OR8K5Q8NH50 307 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 ZUFSPQ96AP4 578 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 PEX11GQ96HA9 241 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 DOHHQ9BU89 302 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 SFXN1Q9H9B4 322 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 SMCO3A2RU48 225 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 SSX5O60225 188 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 TFPTP0C1Z6 253 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 ADORA3P0DMS8 318 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 ZNF84P51523 738 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 PLP2Q04941 152 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 ECH1Q13011 328 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 DEFB110Q30KQ9 67 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 OR2T33Q8NG76 320 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 ABHD5Q8WTS1 349 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 NR4A3Q92570 626 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 TMEM168Q9H0V1 697 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 XYLT2Q9H1B5 865 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 FAAHO00519 579 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 SLC19A2O60779 497 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 SOX30O94993 753 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 GNAO1P09471 354 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 PRKCAP17252 672 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 LCN1P31025 176 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 ZNF33AQ06730 810 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 HSD17B12Q53GQ0 312 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 RTP2Q5QGT7 225 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 DNAAF1Q8NEP3 725 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 STRA6Q9BX79 667 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 DEFB126Q9BYW3 111 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 ZBTB20Q9HC78 741 aaPredicted RBP11.58□□□□□ -0.56
COL8A1-201ENST00000261037 APOBEC3BQ9UH17 382 aaKnown RBP11.58□□□□□ -0.56
COL8A1-201ENST00000261037 CLEC4EQ9ULY5 219 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 YARS2Q9Y2Z4 477 aaKnown RBP11.58□□□□□ -0.56
COL8A1-201ENST00000261037 STYXL1Q9Y6J8 313 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 SCN11AQ9UI33 1791 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 MAS1P04201 325 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 CFL1P23528 166 aaKnown RBP11.58□□□□□ -0.56
COL8A1-201ENST00000261037 CD70P32970 193 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 DOC2AQ14183 400 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 DHCR24Q15392 516 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 CATSPEREQ5SY80 951 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 C22orf42Q6IC83 251 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 TUBA3EQ6PEY2 450 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 ZNF367Q7RTV3 350 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 C15orf40Q8WUR7 153 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 ISOC1Q96CN7 298 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 RDH12Q96NR8 316 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 BOCQ9BWV1 1114 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 EPHA6Q9UF33 1036 aa11.58□□□□□ -0.56
COL8A1-201ENST00000261037 ZNF840PA6NDX5 716 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 DUX1O43812 170 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 HK3P52790 923 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 RPL19P84098 196 aaKnown RBP11.57□□□□□ -0.56
COL8A1-201ENST00000261037 RPS26P11Q5JNZ5 115 aaPredicted RBP11.57□□□□□ -0.56
COL8A1-201ENST00000261037 GLT8D1Q68CQ7 371 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms