RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 FEN1P39748 380 aaKnown RBP14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 XKP51811 444 aa14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 KCNK10P57789 538 aa14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 RPS18P62269 152 aaKnown RBP14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 IGLV3-21P80748 117 aaPredicted RBP14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 DNASE1L3Q13609 305 aa14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 CEBPEQ15744 281 aa14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 VPS26BQ4G0F5 336 aa14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 TIGD2Q4W5G0 525 aa14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 SPDL1Q96EA4 605 aa14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 BHLHE41Q9C0J9 482 aaPredicted RBP14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 ATAD3AQ9NVI7 634 aa14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 C3orf18Q9UK00 162 aa14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 FARSAQ9Y285 508 aaKnown RBP14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 PTRH2Q9Y3E5 179 aaKnown RBP14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 CACNA1AO00555 2505 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 LOC100653049A0A140TA62 436 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 ASPDHA6ND91 283 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 C21orf140B9A014 251 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 PDPK1O15530 556 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 KRT34O76011 436 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 HEXBP07686 556 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 UMODP07911 640 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 SNRPB2P08579 225 aaKnown RBP14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 FRKP42685 505 aaPredicted RBP14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 PCBP4P57723 403 aaKnown RBP14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 STX4Q12846 297 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 FAM91A1Q658Y4 838 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 IL22RA1Q8N6P7 574 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 PLPP5Q8NEB5 264 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 OR2Y1Q8NGV0 311 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 SUN3Q8TAQ9 357 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 OR52E6Q96RD3 313 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 MESP1Q9BRJ9 268 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 CRB3Q9BUF7 120 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 ALOXE3Q9BYJ1 711 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 TCFL5Q9UL49 500 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 ENTPD4Q9Y227 616 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 ZNF780BQ9Y6R6 833 aa14.82□□□□□ -0.04
CCDC90B-201ENST00000260054 CCDC154A6NI56 674 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 MYO1GB0I1T2 1018 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 CD63P08962 238 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 CPMP14384 443 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 EMP2P54851 167 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 RPS15P62841 145 aaKnown RBP14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 NSDHLQ15738 373 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 FAAH2Q6GMR7 532 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 LANCL3Q6ZV70 420 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 TRPM8Q7Z2W7 1104 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 ANKRD46Q86W74 232 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 SNX32Q86XE0 403 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 POU5F2Q8N7G0 328 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 BBS4Q96RK4 519 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 GIMAP4Q9NUV9 329 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 PADI2Q9Y2J8 665 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 CEP295Q9C0D2 2601 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 CELSR3Q9NYQ7 3312 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 A0A1W2PP18 115 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 TCRBV16S1A1N1A0A5B0 115 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 CFLARO15519 480 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 ALOX12BO75342 701 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 PORP16435 677 aaPredicted RBP14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 DDX5P17844 614 aaKnown RBP14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 CSNK2A2P19784 350 aaPredicted RBP14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 PTPN4P29074 926 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 NTSP30990 170 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 PTGER1P34995 402 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 FOLR3P41439 243 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 TLR1Q15399 786 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 CPZQ66K79 652 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 DGAT2L6Q6ZPD8 337 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 ZNF551Q7Z340 670 aaPredicted RBP14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 CCDC116Q8IYX3 515 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 SAMD14Q8IZD0 417 aaPredicted RBP14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 CLECL1Q8IZS7 167 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 LRRC25Q8N386 305 aaPredicted RBP14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 TSPEARQ8WU66 669 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 PPWD1Q96BP3 646 aaKnown RBP14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 AMDHD1Q96NU7 426 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 SLC25A23Q9BV35 468 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 GPR87Q9BY21 358 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 GLIPR2Q9H4G4 154 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 FAM120CQ9NX05 1096 aaKnown RBP14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 IL17BQ9UHF5 180 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 ERVK-11Q9UQG0 969 aa14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 MRPS18BQ9Y676 258 aaKnown RBP14.81□□□□□ -0.04
CCDC90B-201ENST00000260054 A0A1W2PRB8 838 aa14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 RNASET2O00584 256 aaKnown RBP14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 FBP2O00757 339 aa14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 C6orf47O95873 294 aa14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 CYC1P08574 325 aa14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 SLC35E2P0CK97 266 aa14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 COX4I1P13073 169 aa14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 NCBP2P52298 156 aaKnown RBP eCLIP14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 CYLC2Q14093 348 aaPredicted RBP14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 SERTAD2Q14140 314 aa14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 MAPRE2Q15555 327 aa14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 LTB4RQ15722 352 aa14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 SLC2A7Q6PXP3 512 aa14.8□□□□□ -0.04
CCDC90B-201ENST00000260054 RETREG3Q86VR2 466 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms