RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 UEVLDQ8IX04 471 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 OR1F2PQ96R84 312 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 TPT1P8Q9HAU6 139 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 SLC35C2Q9NQQ7 365 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 PNPLA3Q9NST1 481 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 MUTYHQ9UIF7 546 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 PMS2P1A4D2B8 440 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 RNF13O43567 381 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 MEDAGQ5VYS4 303 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 NADSYN1Q6IA69 706 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 LANCL3Q6ZV70 420 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 TSPAN33Q86UF1 283 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 ZNF540Q8NDQ6 660 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 OR6C1Q96RD1 312 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 PRDM9Q9NQV7 894 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 CNOT6Q9ULM6 557 aaKnown RBP12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 LOC102725191A0A1B0GVB3 256 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 IQCMA0A1B0GVH7 501 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 LINC01387J3KSC0 135 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 NOBOXO60393 691 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 PGM3O95394 542 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 IGLV3-27P01718 113 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 GCH1P30793 250 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 IDH3AP50213 366 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 ACTC1P68032 377 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 ACTA1P68133 377 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 PRDX1Q06830 199 aaKnown RBP12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 MBTPS1Q14703 1052 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 MEP1AQ16819 746 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 TYSND1Q2T9J0 566 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 SPANXN2Q5MJ10 180 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 TMEM71Q6P5X7 295 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 ZDHHC21Q8IVQ6 265 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 PNPT1Q8TCS8 783 aaKnown RBP12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 NT5C3BQ969T7 300 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 CCDC74AQ96AQ1 378 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 SLC39A3Q9BRY0 314 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 KLHL25Q9H0H3 589 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 WDR55Q9H6Y2 383 aaPredicted RBP12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 ANGPTL1O95841 491 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 BCHEP06276 602 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 ZCCHC18P0CG32 403 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 NDUFV2P19404 249 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 PAX7P23759 505 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 GDF1P27539 372 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 PCDH1Q08174 1060 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 FOXC1Q12948 553 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 SLC14A1Q13336 389 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 SHISA4Q96DD7 197 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 MYNNQ9NPC7 610 aa12.79□□□□□ -0.36
PRPF38A-201ENST00000257181 LRRC37AA6NMS7 1700 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 SHANK3Q9BYB0 1731 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 SCAMP2O15127 329 aaKnown RBP12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 PSMG1O95456 288 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 UGT2B7P16662 529 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 HIST1H1TP22492 207 aaPredicted RBP12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 GGTA1PQ4G0N0 100 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 TRMT10BQ6PF06 316 aaKnown RBP12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 PACRGLQ8N7B6 248 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 LINC01599Q8WXQ3 324 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 CRISPLD1Q9H336 500 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 A0A1W2PP18 115 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 SLC30A4O14863 429 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 VILLO15195 856 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 XCR1P46094 333 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 C6orf132Q5T0Z8 1188 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 RBM20Q5T481 1227 aaKnown RBP12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 SMRP1Q8NCR6 262 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 HAVCR1Q96D42 359 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 GALPQ9UBC7 116 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 PTBP2Q9UKA9 531 aaKnown RBP12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 OR6C65A6NJZ3 312 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 BCL10O95999 233 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 PGRP06401 933 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 IL3P08700 152 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 IL32P24001 234 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 AOAHP28039 575 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 RPS23P62266 143 aaKnown RBP12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 SMCO1Q147U7 214 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 GPR26Q8NDV2 337 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 SARAFQ96BY9 339 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 CCNL2Q96S94 520 aaPredicted RBP12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 PDE10AQ9Y233 779 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 STMND1H3BQB6 276 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 FAAHO00519 579 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 IFNA6P05013 189 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 CDH12P55289 794 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 MERTKQ12866 999 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 IL18R1Q13478 541 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 C3orf38Q5JPI3 329 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 PLEKHG7Q6ZR37 379 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 NLGN4XQ8N0W4 816 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 KLHL36Q8N4N3 616 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 CPEB3Q8NE35 698 aaKnown RBP12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 NLGN4YQ8NFZ3 816 aaPredicted RBP12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 SGTBQ96EQ0 304 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 C1QTNF2Q9BXJ5 285 aa12.78□□□□□ -0.36
PRPF38A-201ENST00000257181 WSB2Q9NYS7 404 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms