RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 SOX6P35712 828 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 PIK3CBP42338 1070 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 TGM4P49221 684 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 CNTN1Q12860 1018 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 GAB4Q2WGN9 574 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 TYW3Q6IPR3 259 aaKnown RBP9.61□□□□□ -0.87
COPB1-201ENST00000249923 SYCE2Q6PIF2 218 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 CELF5Q8N6W0 485 aaKnown RBP9.61□□□□□ -0.87
COPB1-201ENST00000249923 ZNF486Q96H40 463 aaPredicted RBP9.61□□□□□ -0.87
COPB1-201ENST00000249923 MARK1Q9P0L2 795 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 CLEC4AQ9UMR7 237 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 LSM2Q9Y333 95 aaKnown RBP9.61□□□□□ -0.87
COPB1-201ENST00000249923 DENND4AQ7Z401 1863 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 A0A1W2PRB8 838 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 SLC35F4A4IF30 521 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 KPNA3O00505 521 aaPredicted RBP9.61□□□□□ -0.87
COPB1-201ENST00000249923 ARHGEF9O43307 516 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 GPX5O75715 221 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 SOX14O95416 240 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 CCL5P13501 91 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 ANXA8P13928 327 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 PTNP21246 168 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 SDHBP21912 280 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 PNLIPRP1P54315 467 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 HTRA3P83110 453 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 TBRG1Q3YBR2 411 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 ZNF697Q5TEC3 545 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 TCTN3Q6NUS6 607 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 TNFAIP8L2Q6P589 184 aaPredicted RBP9.61□□□□□ -0.87
COPB1-201ENST00000249923 HMGN2P46Q86SG4 172 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 OXR1Q8N573 874 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 DENND6BQ8NEG7 585 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 RAB8BQ92930 207 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 CLIP3Q96DZ5 547 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 FUZQ9BT04 418 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 BARHL1Q9BZE3 327 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 TMEM39AQ9NV64 488 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 TMEM98Q9Y2Y6 226 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 AP1M2Q9Y6Q5 423 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 ENPP4Q9Y6X5 453 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 OR6C70A6NIJ9 312 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 ARHGAP33O14559 1287 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 MMP20O60882 483 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 C6P13671 934 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 CEBPBP17676 345 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 SLC6A11P48066 632 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 RBBP4Q09028 425 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 PLPP4Q5VZY2 271 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 PAQR6Q6TCH4 344 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 CCDC149Q6ZUS6 474 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 SLC9B2Q86UD5 537 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 SLC34A3Q8N130 599 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 TP53I13Q8NBR0 393 aaPredicted RBP9.61□□□□□ -0.87
COPB1-201ENST00000249923 SUN5Q8TC36 379 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 GEMIN6Q8WXD5 167 aaKnown RBP9.61□□□□□ -0.87
COPB1-201ENST00000249923 FCGR1BQ92637 280 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 PDXPQ96GD0 296 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 OPALINQ96PE5 141 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 EFCAB11Q9BUY7 163 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 LGR4Q9BXB1 951 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 MMP27Q9H306 513 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 SYNPO2LQ9H987 977 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 ZNF556Q9HAH1 456 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 SLC25A19Q9HC21 320 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 FZD3Q9NPG1 666 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 HCN4Q9Y3Q4 1203 aa9.61□□□□□ -0.87
COPB1-201ENST00000249923 FEZF1A0PJY2 475 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 A8MVJ9 347 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 C4orf51C9J302 202 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 LRRTM2O43300 516 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 ENTPD6O75354 484 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 GADD45GO95257 159 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 BCHEP06276 602 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 BSGP35613 385 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 CHI3L1P36222 383 aaPredicted RBP9.6□□□□□ -0.87
COPB1-201ENST00000249923 SOX3P41225 446 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 PRIM2P49643 509 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 CAMK1Q14012 370 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 DHCR24Q15392 516 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 PDZK1Q5T2W1 519 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 C9orf64Q5T6V5 341 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 SAXO2Q658L1 398 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 FRMPD2BQ6IN97 320 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 ERAP2Q6P179 960 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 UBE3DQ7Z6J8 389 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 WDR36Q8NI36 951 aaKnown RBP9.6□□□□□ -0.87
COPB1-201ENST00000249923 COL21A1Q96P44 957 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 F2RL3Q96RI0 385 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 GPA33Q99795 319 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 CDCA4Q9BXL8 241 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 EPHX3Q9H6B9 360 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 HHATLQ9HCP6 504 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 C11orf16Q9NQ32 467 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 ICKQ9UPZ9 632 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 ANKRD34BA5PLL1 514 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 HMGN4O00479 90 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 TMPRSS11DO60235 418 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 SEMA3DO95025 777 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 NTN1O95631 604 aa9.6□□□□□ -0.87
COPB1-201ENST00000249923 RPLP0P05388 317 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms