RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 CYP4F8P98187 520 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 TXNDC8Q6A555 127 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 TIGD3Q6B0B8 471 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 ABI3BPQ7Z7G0 1075 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 METTL3Q86U44 580 aaKnown RBP14.74□□□□□ -0.05
DDX55-201ENST00000238146 PDZD3Q86UT5 571 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 MMP21Q8N119 569 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 SLC38A5Q8WUX1 472 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 CITED4Q96RK1 184 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 CXorf36Q9H7Y0 433 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 SH2B3Q9UQQ2 575 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 FAAHO00519 579 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 ZNF197O14709 1029 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 TSPAN6O43657 245 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 BCHEP06276 602 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 RPL3P39023 403 aaKnown RBP14.74□□□□□ -0.05
DDX55-201ENST00000238146 ATN1P54259 1190 aaPredicted RBP14.74□□□□□ -0.05
DDX55-201ENST00000238146 CAV3P56539 151 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 RPS25P62851 125 aaKnown RBP14.74□□□□□ -0.05
DDX55-201ENST00000238146 TNK1Q13470 666 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 SYTL3Q4VX76 610 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 ZNF730Q6ZMV8 503 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 LAPTM4BQ86VI4 370 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 PLCZ1Q86YW0 608 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 SLC30A8Q8IWU4 369 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 FAM26EQ8N5C1 309 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 OR52P1PQ8NH57 321 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 ANGPTL6Q8NI99 470 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 DEDD2Q8WXF8 326 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 TM9SF4Q92544 642 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 TMEM159Q96B96 161 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 C1GALT1C1Q96EU7 318 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 ZBED6CLQ96FA7 236 aaPredicted RBP14.74□□□□□ -0.05
DDX55-201ENST00000238146 WFDC6Q9BQY6 131 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 MED18Q9BUE0 208 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 SLC6A16Q9GZN6 736 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 DMRT3Q9NQL9 472 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 TESQ9UGI8 421 aaKnown RBP14.74□□□□□ -0.05
DDX55-201ENST00000238146 CARD8Q9Y2G2 431 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 DOCK6Q96HP0 2047 aa14.74□□□□□ -0.05
DDX55-201ENST00000238146 AKR7A2O43488 359 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 RAB36O95755 333 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 HLA-DQB1P01920 261 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 KLK1P06870 262 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 H1F0P07305 194 aaKnown RBP14.73□□□□□ -0.05
DDX55-201ENST00000238146 PSKH1P11801 424 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 TARDBPQ13148 414 aaKnown RBP eCLIP14.73□□□□□ -0.05
DDX55-201ENST00000238146 SLBPQ14493 270 aaKnown RBP eCLIP14.73□□□□□ -0.05
DDX55-201ENST00000238146 PLK5Q496M5 336 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 SYT14P1Q58G82 188 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 OR2G6Q5TZ20 316 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 DPY19L3Q6ZPD9 716 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 DNAJB7Q7Z6W7 309 aaPredicted RBP14.73□□□□□ -0.05
DDX55-201ENST00000238146 HORMAD2Q8N7B1 307 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 LMNTD1Q8N9Z9 388 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 PCSK9Q8NBP7 692 aaKnown RBP14.73□□□□□ -0.05
DDX55-201ENST00000238146 DBF4BQ8NFT6 615 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 OR4D11Q8NGI4 311 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 ZNF461Q8TAF7 563 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 SLC7A13Q8TCU3 470 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 SYT17Q9BSW7 474 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 PPP1R3EQ9H7J1 279 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 NIPAL2Q9H841 368 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 RBFOX1Q9NWB1 397 aaKnown RBP14.73□□□□□ -0.05
DDX55-201ENST00000238146 SF3B6Q9Y3B4 125 aaKnown RBP14.73□□□□□ -0.05
DDX55-201ENST00000238146 KIAA1671Q9BY89 1806 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 TRAV19A0A0A6YYK7 116 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 FOXE1O00358 373 aaPredicted RBP14.73□□□□□ -0.05
DDX55-201ENST00000238146 PDE9AO76083 593 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 C1QBP02746 253 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 CST5P28325 142 aaPredicted RBP14.73□□□□□ -0.05
DDX55-201ENST00000238146 DGKGP49619 791 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 CTSCP53634 463 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 TNFAIP8L2Q6P589 184 aaPredicted RBP14.73□□□□□ -0.05
DDX55-201ENST00000238146 C22orf39Q6P5X5 142 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 UNC5DQ6UXZ4 953 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 DEF8Q6ZN54 512 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 ZC3HAV1LQ96H79 300 aaKnown RBP14.73□□□□□ -0.05
DDX55-201ENST00000238146 TM9SF2Q99805 663 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 TMEM39AQ9NV64 488 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 COMMD3Q9UBI1 195 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 BACE2Q9Y5Z0 518 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 CLCA3PQ9Y6N3 262 aa14.73□□□□□ -0.05
DDX55-201ENST00000238146 C5orf58C9J3I9 102 aa14.72□□□□□ -0.05
DDX55-201ENST00000238146 STK25O00506 426 aa14.72□□□□□ -0.05
DDX55-201ENST00000238146 ARHGEF9O43307 516 aa14.72□□□□□ -0.05
DDX55-201ENST00000238146 ICMTO60725 284 aa14.72□□□□□ -0.05
DDX55-201ENST00000238146 HCN1O60741 890 aa14.72□□□□□ -0.05
DDX55-201ENST00000238146 IL3P08700 152 aa14.72□□□□□ -0.05
DDX55-201ENST00000238146 FAM157BP0CG42 384 aa14.72□□□□□ -0.05
DDX55-201ENST00000238146 SLC2A2P11168 524 aaPredicted RBP14.72□□□□□ -0.05
DDX55-201ENST00000238146 UQCRC2P22695 453 aa14.72□□□□□ -0.05
DDX55-201ENST00000238146 CRTC2Q53ET0 693 aaPredicted RBP14.72□□□□□ -0.05
DDX55-201ENST00000238146 Q6ZVL8 140 aa14.72□□□□□ -0.05
DDX55-201ENST00000238146 HSD11B1LQ7Z5J1 315 aa14.72□□□□□ -0.05
DDX55-201ENST00000238146 Q8N402 240 aa14.72□□□□□ -0.05
DDX55-201ENST00000238146 ZNF557Q8N988 423 aaPredicted RBP14.72□□□□□ -0.05
DDX55-201ENST00000238146 C19orf18Q8NEA5 215 aa14.72□□□□□ -0.05
DDX55-201ENST00000238146 DUSP18Q8NEJ0 188 aa14.72□□□□□ -0.05
DDX55-201ENST00000238146 FIBINQ8TAL6 211 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms