RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 COMMD3Q9UBI1 195 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 CPNE7Q9UBL6 633 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 FAM227AF5H4B4 570 aa8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 PDE9AO76083 593 aa8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 RFX2P48378 723 aa8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 ZNF81P51508 661 aa8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 RPS13P62277 151 aaKnown RBP8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 SNRPD1P62314 119 aaKnown RBP8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 SPIBQ01892 262 aa8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 PRKCDQ05655 676 aa8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 TSTA3Q13630 321 aaPredicted RBP8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 POM121L1PQ3SYA9 428 aa8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 LIPJQ5W064 366 aa8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 FBXO46Q6PJ61 603 aaPredicted RBP8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 AGTRAPQ6RW13 159 aa8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 ZNF605Q86T29 641 aa8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 OR7G3Q8NG95 312 aa8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 ZFAND1Q8TCF1 268 aa8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 ZNF431Q8TF32 576 aaPredicted RBP8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 POP5Q969H6 163 aaKnown RBP8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 TCF25Q9BQ70 676 aa8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 UQCC2Q9BRT2 126 aa8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 CCM2Q9BSQ5 444 aa8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 TRAF4Q9BUZ4 470 aaPredicted RBP8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 MS4A7Q9GZW8 240 aaPredicted RBP8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 CLEC4MQ9H2X3 399 aaPredicted RBP8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 SCML1Q9UN30 329 aa8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 PADI2Q9Y2J8 665 aa8.96□□□□□ -0.97
HLA-DOA-201ENST00000229829 MGAT4DA6NG13 374 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 MPC1LP0DKB6 136 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 PDHA2P29803 388 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 MAPK8P45983 427 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 CTSCP53634 463 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 AP2S1P53680 142 aaPredicted RBP8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 BNC1Q01954 994 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 CSTF3Q12996 717 aaKnown RBP8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 TARDBPQ13148 414 aaKnown RBP eCLIP8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 TBCEQ15813 527 aaPredicted RBP8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 LHX8Q68G74 356 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 ANKRD54Q6NXT1 300 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 C22orf39Q6P5X5 142 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 LGI4Q8N135 537 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 OR4M1Q8NGD0 313 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 NFKBIDQ8NI38 313 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 MCCC1Q96RQ3 725 aaPredicted RBP8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 HDHD2Q9H0R4 259 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 MS4A12Q9NXJ0 267 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 STOX2Q9P2F5 926 aaPredicted RBP8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 SH2B3Q9UQQ2 575 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 ALG5Q9Y673 324 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 LOC102723532A0A0G2JNH3 316 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 FADS2P1A8MWK0 482 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 TSPAN6O43657 245 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 PRMT3O60678 531 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 C6orf47O95873 294 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 NAGAP17050 411 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 GABRB1P18505 474 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 KELP23276 732 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 GZMKP49863 264 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 AP1S2P56377 157 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 MEF2AQ02078 507 aaPredicted RBP8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 GNA13Q14344 377 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 PRSS53Q2L4Q9 553 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 PLEKHS1Q5SXH7 462 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 SPOUT1Q5T280 376 aaKnown RBP8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 ZNF767PQ75MW2 155 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 C11orf65Q8NCR3 313 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 B3GNT7Q8NFL0 401 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 OR9Q1Q8NGQ5 310 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 FIBINQ8TAL6 211 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 ASZ1Q8WWH4 475 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 MTG2Q9H4K7 406 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 WASH6PQ9NQA3 447 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 MAP4K5Q9Y4K4 846 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 INSL5Q9Y5Q6 135 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 CFAP20Q9Y6A4 193 aaKnown RBP8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 XIRP2A4UGR9 3374 aa8.96□□□□□ -0.98
HLA-DOA-201ENST00000229829 CHD7Q9P2D1 2997 aa8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 PRAMEF33A0A0G2JMD5 474 aa8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 PRAMEF10O60809 474 aa8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 OLFM2O95897 454 aa8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 HRGP04196 525 aa8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 ZNF8P17098 575 aaPredicted RBP8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 CFL1P23528 166 aaKnown RBP8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 UGT2B10P36537 528 aa8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 SOX3P41225 446 aa8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 RGS6P49758 472 aa8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 MPEG1Q2M385 716 aa8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 UAP1L1Q3KQV9 507 aa8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 KLHL12Q53G59 568 aa8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 RASSF6Q6ZTQ3 369 aa8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 ASB18Q6ZVZ8 466 aa8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 VWA5B2Q8N398 1253 aa8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 OR4C15Q8NGM1 316 aa8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 LILRB1Q8NHL6 650 aaPredicted RBP8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 CEP76Q8TAP6 659 aa8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 MYDGFQ969H8 173 aa8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 NEIL2Q969S2 332 aa8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 C19orf43Q9BQ61 176 aa8.95□□□□□ -0.98
HLA-DOA-201ENST00000229829 WACQ9BTA9 647 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms