RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 ANKRA2Q9H9E1 313 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 SLC28A3Q9HAS3 691 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 ZC4H2Q9NQZ6 224 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 RPS10-NUDT3A0A1W2PQS6 291 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 ORC5O43913 435 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 STK16O75716 305 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 GKP32189 559 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 TALDO1P37837 337 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 ETV5P41161 510 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 ETV1P50549 477 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 SELENOWP63302 87 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 ZNF91Q05481 1191 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 TCTN1Q2MV58 587 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 CRIPAKQ8N1N5 446 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 DNAJB8Q8NHS0 232 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 NFKBIDQ8NI38 313 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 GATAD2BQ8WXI9 593 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 SENP5Q96HI0 755 aaPredicted RBP13.42□□□□□ -0.26
SF1-201ENST00000227503 GPR137Q96N19 417 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 TMEM175Q9BSA9 504 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 C2orf49Q9BVC5 232 aaPredicted RBP13.42□□□□□ -0.26
SF1-201ENST00000227503 HDHD2Q9H0R4 259 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 KCNN2Q9H2S1 579 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 TMEM245Q9H330 911 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 NMNAT1Q9HAN9 279 aaPredicted RBP13.42□□□□□ -0.26
SF1-201ENST00000227503 SLAMF7Q9NQ25 335 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 FTSJ1Q9UET6 329 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 EXO1Q9UQ84 846 aaKnown RBP13.42□□□□□ -0.26
SF1-201ENST00000227503 PADI2Q9Y2J8 665 aa13.42□□□□□ -0.26
SF1-201ENST00000227503 LOC105369274A0A096LPK9 316 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 GLYATL1P3A0A0U1RQE8 302 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 TLR4O00206 839 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 LZTS3O60299 673 aaPredicted RBP13.41□□□□□ -0.26
SF1-201ENST00000227503 RAF1P04049 648 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 CRISP1P54107 249 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 KLHL22Q53GT1 634 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 MZT2BQ6NZ67 158 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 ERICH5Q6P6B1 374 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 PRSS42Q7Z5A4 293 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 OR4N4Q8N0Y3 316 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 GHDCQ8N2G8 530 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 ZNF655Q8N720 491 aaPredicted RBP13.41□□□□□ -0.26
SF1-201ENST00000227503 OR4K1Q8NGD4 311 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 TM9SF4Q92544 642 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 LINC00052Q96N35 136 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 C19orf43Q9BQ61 176 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 HTATIP2Q9BUP3 242 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 TSSK6Q9BXA6 273 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 ACER3Q9NUN7 267 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 FAM8A1Q9UBU6 413 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 SCN8AQ9UQD0 1980 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 EFEMP2O95967 443 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 GBAP04062 536 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 HOXD4P09016 255 aaPredicted RBP13.41□□□□□ -0.26
SF1-201ENST00000227503 SOX18P35713 384 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 CLCNKAP51800 687 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 RHAGQ02094 409 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 BCL2L1Q07817 233 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 CRYZQ08257 329 aaKnown RBP13.41□□□□□ -0.26
SF1-201ENST00000227503 PLD1Q13393 1074 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 ZNF628Q5EBL2 1059 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 LYPLAL1Q5VWZ2 237 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 IL20RBQ6UXL0 311 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 UNC5DQ6UXZ4 953 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 APCDD1Q8J025 514 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 MARVELD1Q9BSK0 173 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 MCOLN1Q9GZU1 580 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 CRLS1Q9UJA2 301 aa13.41□□□□□ -0.26
SF1-201ENST00000227503 HELZP42694 1942 aaKnown RBP13.41□□□□□ -0.26
SF1-201ENST00000227503 TRBV4-1A0A0J9YWV2 114 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 SHISA3A0PJX4 238 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 ZAR1LA6NP61 321 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 GABRR3A8MPY1 467 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 CASKO14936 926 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 GREM1O60565 184 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 SERPINI2O75830 405 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 GADD45GO95257 159 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 LHCGRP22888 699 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 ITGB7P26010 798 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 RGNQ15493 299 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 GPR68Q15743 365 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 GARNL3Q5VVW2 1013 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 NPAS4Q8IUM7 802 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 NXPE1Q8N323 547 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 DCAF4L2Q8NA75 395 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 KLHL6Q8WZ60 621 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 VN1R3Q9BXE9 311 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 ATG10Q9H0Y0 220 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 MED28Q9H204 178 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 PPP1R3EQ9H7J1 279 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 ARL15Q9NXU5 204 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 CNOT2Q9NZN8 540 aaKnown RBP13.4□□□□□ -0.26
SF1-201ENST00000227503 LRFN2Q9ULH4 789 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 XIRP2A4UGR9 3374 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 KCNE1BA0A087WTH5 132 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 GSAPA4D1B5 854 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 SIGLEC5O15389 551 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 SELPP16109 830 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 AMD1P17707 334 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 SRP9P49458 86 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms