RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 RTL3Q8N8U3 475 aaKnown RBP6.54□□□□□ -1.36
CCL1-201ENST00000225842 GDAP1Q8TB36 358 aa6.54□□□□□ -1.36
CCL1-201ENST00000225842 KLK6Q92876 244 aa6.54□□□□□ -1.36
CCL1-201ENST00000225842 LRRC45Q96CN5 670 aa6.54□□□□□ -1.36
CCL1-201ENST00000225842 RBM41Q96IZ5 413 aaKnown RBP6.54□□□□□ -1.36
CCL1-201ENST00000225842 SLC45A3Q96JT2 553 aa6.54□□□□□ -1.36
CCL1-201ENST00000225842 ZNF670Q9BS34 389 aa6.54□□□□□ -1.36
CCL1-201ENST00000225842 SLC29A3Q9BZD2 475 aa6.54□□□□□ -1.36
CCL1-201ENST00000225842 RAB6CQ9H0N0 254 aa6.54□□□□□ -1.36
CCL1-201ENST00000225842 PIGMQ9H3S5 423 aa6.54□□□□□ -1.36
CCL1-201ENST00000225842 DHX35Q9H5Z1 703 aaKnown RBP6.54□□□□□ -1.36
CCL1-201ENST00000225842 SPAG4Q9NPE6 437 aa6.54□□□□□ -1.36
CCL1-201ENST00000225842 FZD3Q9NPG1 666 aa6.54□□□□□ -1.36
CCL1-201ENST00000225842 PNRC2Q9NPJ4 139 aaKnown RBP6.54□□□□□ -1.36
CCL1-201ENST00000225842 HAO2Q9NYQ3 351 aa6.54□□□□□ -1.36
CCL1-201ENST00000225842 TAS2R14Q9NYV8 317 aa6.54□□□□□ -1.36
CCL1-201ENST00000225842 CISD1Q9NZ45 108 aaKnown RBP6.54□□□□□ -1.36
CCL1-201ENST00000225842 AKAP7Q9P0M2 348 aaPredicted RBP6.54□□□□□ -1.36
CCL1-201ENST00000225842 ERVW-1Q9UQF0 538 aa6.54□□□□□ -1.36
CCL1-201ENST00000225842 ZNF148Q9UQR1 794 aa6.54□□□□□ -1.36
CCL1-201ENST00000225842 POMT1Q9Y6A1 747 aa6.54□□□□□ -1.36
CCL1-201ENST00000225842 PLXNA2O75051 1894 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 NIPBLQ6KC79 2804 aaeCLIP6.53□□□□□ -1.36
CCL1-201ENST00000225842 TRAV34A0A0B4J273 112 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 A0A1W2PQ67 120 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 GOLGA6L9A6NEM1 432 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 TMEM202A6NGA9 273 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 MIF4GDA9UHW6 222 aaKnown RBP6.53□□□□□ -1.36
CCL1-201ENST00000225842 PSTPIP1O43586 416 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 ZNF821O75541 412 aaPredicted RBP6.53□□□□□ -1.36
CCL1-201ENST00000225842 ATP6V1B1P15313 513 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 ERCC2P18074 760 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 CA4P22748 312 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 MIPP30301 263 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 UGT1A3P35503 534 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 HSPA9P38646 679 aaKnown RBP6.53□□□□□ -1.36
CCL1-201ENST00000225842 GPR143P51810 404 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 SNRPD1P62314 119 aaKnown RBP6.53□□□□□ -1.36
CCL1-201ENST00000225842 GNA12Q03113 381 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 FZD2Q14332 565 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 ELAVL3Q14576 367 aaKnown RBP6.53□□□□□ -1.36
CCL1-201ENST00000225842 MESDQ14696 234 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 RFTN1Q14699 578 aaPredicted RBP6.53□□□□□ -1.36
CCL1-201ENST00000225842 DPYSL2Q16555 572 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 ACCSLQ4AC99 568 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 MIDNQ504T8 468 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 TRNP1Q6NT89 227 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 C11orf63Q6NUN7 778 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 LINGO2Q7L985 606 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 PHLDB2Q86SQ0 1253 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 TSPAN33Q86UF1 283 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 PARGQ86W56 976 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 ZDHHC23Q8IYP9 409 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 NDUFAF2Q8N183 169 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 PCDH20Q8N6Y1 951 aaKnown RBP6.53□□□□□ -1.36
CCL1-201ENST00000225842 ARL10Q8N8L6 244 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 SETD6Q8TBK2 473 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 KIAA1524Q8TCG1 905 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 MGARPQ8TDB4 240 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 OR8D1Q8WZ84 308 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 KIAA1143Q96AT1 154 aaPredicted RBP6.53□□□□□ -1.36
CCL1-201ENST00000225842 HAUS1Q96CS2 278 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 NUDCD1Q96RS6 583 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 PSMB7Q99436 277 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 CHP1Q99653 195 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 FEM1AQ9BSK4 669 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 PCGF1Q9BSM1 259 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 SNRNP25Q9BV90 132 aaKnown RBP6.53□□□□□ -1.36
CCL1-201ENST00000225842 B3GNT4Q9C0J1 378 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 NPFFR1Q9GZQ6 430 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 LRRN3Q9H3W5 708 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 GPN2Q9H9Y4 310 aaPredicted RBP6.53□□□□□ -1.36
CCL1-201ENST00000225842 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.53□□□□□ -1.36
CCL1-201ENST00000225842 COQ3Q9NZJ6 369 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 DNAJB9Q9UBS3 223 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 PCSK1NQ9UHG2 260 aa6.53□□□□□ -1.36
CCL1-201ENST00000225842 RP1L1Q8IWN7 2480 aaPredicted RBP6.52□□□□□ -1.37
CCL1-201ENST00000225842 SPTY2D1-AS1A0A0U1RR47 76 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 HEATR9A2RTY3 570 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 K7ERQ8 282 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 RSL1D1O76021 490 aaKnown RBP6.52□□□□□ -1.37
CCL1-201ENST00000225842 CD160O95971 181 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 CTSLP07711 333 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 HNRNPA2B1P22626 353 aaKnown RBP6.52□□□□□ -1.37
CCL1-201ENST00000225842 DNASE1P24855 282 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 DCTDP32321 178 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 CDH6P55285 790 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 MRPS34P82930 218 aaKnown RBP6.52□□□□□ -1.37
CCL1-201ENST00000225842 HSF1Q00613 529 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 ZFP36L1Q07352 338 aaKnown RBP6.52□□□□□ -1.37
CCL1-201ENST00000225842 C1orf61Q13536 156 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 INPP5JQ15735 1006 aaPredicted RBP6.52□□□□□ -1.37
CCL1-201ENST00000225842 SNAPC1Q16533 368 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 MMEL1Q495T6 779 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 CCDC92Q53HC0 331 aaPredicted RBP6.52□□□□□ -1.37
CCL1-201ENST00000225842 SUMO4Q6EEV6 95 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 TMEM71Q6P5X7 295 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 ZNF813Q6ZN06 617 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 PQLC2Q6ZP29 291 aa6.52□□□□□ -1.37
CCL1-201ENST00000225842 FAM57BQ71RH2 274 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms