RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 FZD6O60353 706 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 TCRBP04435 133 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 FKBP1AP62942 108 aaKnown RBP13.99□□□□□ -0.17
PTPRA-201ENST00000216877 CAMK2DQ13557 499 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 PLEKHH3Q7Z736 793 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 H2AFJQ9BTM1 129 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 NT5DC2Q9H857 520 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 C14orf105Q9NVL8 296 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 TAS2R7Q9NYW3 318 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 ADAM11O75078 769 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 SLC6A4P31645 630 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 ADRA1AP35348 466 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 RENBPP51606 427 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 SF1Q15637 639 aaKnown RBP13.98□□□□□ -0.17
PTPRA-201ENST00000216877 INTS6LQ5JSJ4 861 aaKnown RBP13.98□□□□□ -0.17
PTPRA-201ENST00000216877 UNC5DQ6UXZ4 953 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 TAC4Q86UU9 113 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 C12orf45Q8N5I9 185 aaPredicted RBP13.98□□□□□ -0.17
PTPRA-201ENST00000216877 FAM46DQ8NEK8 389 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 ZCCHC4Q9H5U6 513 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 TLR8Q9NR97 1041 aaKnown RBP13.98□□□□□ -0.17
PTPRA-201ENST00000216877 KCMF1Q9P0J7 381 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 RNGTTO60942 597 aaKnown RBP13.98□□□□□ -0.17
PTPRA-201ENST00000216877 ZNF286BP0CG31 522 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 CRISP1P54107 249 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 ZNF235Q14590 738 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 MPEG1Q2M385 716 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 SLC25A25Q6KCM7 469 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 PLPP6Q8IY26 295 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 CLDN22Q8N7P3 220 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 ADAMTS14Q8WXS8 1223 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 ADAT1Q9BUB4 502 aaKnown RBP13.98□□□□□ -0.17
PTPRA-201ENST00000216877 SCP2D1Q9UJQ7 156 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 NEUROG3Q9Y4Z2 214 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 MFSD2BA6NFX1 497 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 TMEM88BA6NKF7 163 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 KCNK5O95279 499 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 PTPN6P29350 595 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 BDKRB1P46663 353 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 EVX1P49640 407 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 STARP49675 285 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 PRMT2P55345 433 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 WSCD1Q658N2 575 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 PTRHD1Q6GMV3 140 aaKnown RBP13.98□□□□□ -0.17
PTPRA-201ENST00000216877 GPRIN1Q7Z2K8 1008 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 FAM124AQ86V42 546 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 UNC93AQ86WB7 457 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 ZDHHC1Q8WTX9 485 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 FAM167AQ96KS9 214 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 GAS2L1Q99501 681 aaPredicted RBP13.98□□□□□ -0.17
PTPRA-201ENST00000216877 NKX6-2Q9C056 277 aaPredicted RBP13.98□□□□□ -0.17
PTPRA-201ENST00000216877 AP5M1Q9H0R1 490 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 SLC25A51Q9H1U9 297 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 OR10A4Q9H209 315 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 EVA1AQ9H8M9 152 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 TPT1P8Q9HAU6 139 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 DLL4Q9NR61 685 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 IMP3Q9NV31 184 aaKnown RBP13.98□□□□□ -0.17
PTPRA-201ENST00000216877 SLC22A7Q9Y694 548 aa13.98□□□□□ -0.17
PTPRA-201ENST00000216877 GRXCR2A6NFK2 248 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 LRRC72A6NJI9 287 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 SIGLEC6O43699 453 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 SDC3O75056 442 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 RPP40O75818 363 aaKnown RBP13.97□□□□□ -0.17
PTPRA-201ENST00000216877 PEPDP12955 493 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 PKMP14618 531 aaKnown RBP13.97□□□□□ -0.17
PTPRA-201ENST00000216877 ELK1P19419 428 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 PREPP48147 710 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 STK19P49842 368 aaPredicted RBP13.97□□□□□ -0.17
PTPRA-201ENST00000216877 SELENOPP49908 381 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 RAB13P51153 203 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 STC1P52823 247 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 PUM1Q14671 1186 aaKnown RBP eCLIP13.97□□□□□ -0.171e-7■■□□□ 13.4
PTPRA-201ENST00000216877 TARBP2Q15633 366 aaKnown RBP13.97□□□□□ -0.17
PTPRA-201ENST00000216877 SLC14A2Q15849 920 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 TRMT11Q7Z4G4 463 aaKnown RBP13.97□□□□□ -0.17
PTPRA-201ENST00000216877 ZER1Q7Z7L7 766 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 RNF175Q8N4F7 328 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 GABARAPL3Q9BY60 117 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 ERAP1Q9NZ08 941 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 ZNF69Q9UC07 566 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 PHF11Q9UIL8 331 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 FLVCR2Q9UPI3 526 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 NOSIPQ9Y314 301 aaKnown RBP13.97□□□□□ -0.17
PTPRA-201ENST00000216877 RPL36Q9Y3U8 105 aaKnown RBP13.97□□□□□ -0.17
PTPRA-201ENST00000216877 ARID1AO14497 2285 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 RRN3P2A6NIE6 340 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 ARHGEF33A8MVX0 844 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 PAGE1O75459 146 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 RASGRP1O95267 797 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 URODP06132 367 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 IRF5Q13568 498 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 RBMS2Q15434 407 aaKnown RBP13.97□□□□□ -0.17
PTPRA-201ENST00000216877 ST3GAL2Q16842 350 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 CBLL1Q75N03 491 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 RPLP0P6Q8NHW5 317 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 WNT2BQ93097 391 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 NXPE3Q969Y0 559 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 CDKN2AIPNLQ96HQ2 116 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 GINS4Q9BRT9 223 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms