RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Vmn2r84D3YWE3 849 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm8444F6XS56 118 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Spdye4cI6XKQ3 339 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Vmn2r21K7N6Y7 853 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Vmn2r20L7N2B1 853 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Hbb-bh0P04443 147 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gja1P23242 382 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 ptchd1Q14B62 888 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Timm8a2Q4FZG7 97 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 BC024139Q8BVJ3 772 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Mfsd6Q8CBH5 775 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Cacul1Q8R0X2 377 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Isl2Q9CXV0 359 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Upf1Q9EPU0 1124 aaKnown RBP10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Cd63P41731 238 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Slc5a10Q5SWY8 596 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Clba1Q8BHN9 321 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Cnppd1Q8K158 407 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gpat4Q8K2C8 456 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Mcoln1Q99J21 580 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 VasnQ9CZT5 673 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Arv1Q9D0U9 266 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Rexo2Q9D8S4 237 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Vmn1r49Q9WUF1 310 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 ChadO55226 358 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm7030Q0WXH6 285 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Prr14Q7TPN9 612 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Zc3h14Q8BJ05 735 aaKnown RBP10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 FarsaQ8C0C7 508 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Pcdhga12Q91XY7 932 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Tor1aQ9ER39 333 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 B9d1Q9R1S0 204 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Slc7a7Q9Z1K8 510 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm42372A0A1B0GT27 204 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Mthfd2lD3YZG8 338 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Vmn1r55E9Q8I6 310 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Pwwp2aQ69Z61 730 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Acp6Q8BP40 418 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Hspa12aQ8K0U4 675 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 RTRAFQ9CQE8 244 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Dhrs7Q9CXR1 338 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Naa10Q9QY36 235 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 PikfyveQ9Z1T6 2097 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 6720489N17RikA0A1Y7VJW0 127 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Ttll11A4Q9F4 727 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Sult2b1O35400 338 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Parp8Q3UD82 852 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Slc39a12Q5FWH7 689 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Polr2mQ6P6I6 366 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Cstf2tQ8C7E9 632 aaKnown RBP10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Rbm48Q8K2X2 371 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 3110001I22RikQ9CZ70 312 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 TheglQ9DA15 459 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 AcoxlQ9DBS4 632 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Scamp5Q9JKD3 235 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Vmn2r116E9Q6I0 856 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Zfp605E9QAH2 694 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Glp1rO35659 463 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Tia1P52912 386 aaKnown RBP10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Atf4Q06507 349 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Znf182Q6P560 627 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Eid2Q6X7S9 236 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Kctd20Q8CDD8 419 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Tspan10Q8VCF5 331 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr1047Q8VGS0 319 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 NepnQ9CQ76 512 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 2410137M14RikQ9CWF0 162 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Col5a2Q3U962 1497 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 A0A286YD17 136 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Bhlhe40O35185 411 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Cacng1O70578 223 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 B3gat2P59270 324 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Znf750Q8BH05 703 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm5591Q8CDK1 855 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Cavin3Q91VJ2 260 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Spef1Q99JL1 234 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Fundc2Q9D6K8 151 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Il21Q9ES17 146 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Ssna1Q9JJ94 119 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Avpr1bQ9WU02 421 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Galr2O88854 371 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 ThpoP40226 356 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Rhox5P52651 210 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 ErfP70459 551 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Hyal5Q812F3 526 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 NelfaQ8BG30 530 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Rnf121Q8R1Z9 327 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Dcp1aQ91YD3 602 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Slc7a9Q9QXA6 487 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Myo5aQ99104 1853 aaKnown RBP10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm16432A0A0A6YXX9 775 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Kbtbd6E9PYD7 486 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Tmem14aP56983 99 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Elavl3Q60900 367 aaKnown RBP10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Prl3a1Q78Y73 227 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Rbm12Q8R4X3 992 aaKnown RBP10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gpr146Q99LE2 333 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Zfp992B1ASD8 573 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Nr1h5E9Q5A6 505 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Ccnd3P30282 292 aa10.05□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms