RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Arel1Q8CHG5 823 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tsen15Q8R3W5 168 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 HpgdQ8VCC1 269 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Pskh1Q91YA2 424 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Uck2Q99PM9 261 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Dcdc2cQ9D1B8 347 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Rsph9Q9D9V4 276 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Oaz3Q9R109 243 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Uba2Q9Z1F9 638 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Lama2Q60675 3118 aaKnown RBP9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 CntrlA2AL36 2334 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm5938A2AEN9 163 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 CatsperbA2RTF1 1109 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Vmn2r92L7N2A4 860 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Phox2bO35690 314 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 ChadO55226 358 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ntf3P20181 258 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Polr1cP52432 346 aaKnown RBP9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tsc22d1P62500 1077 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Xrra1Q3U3V8 786 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Usp30Q3UN04 517 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tmub2Q3V209 319 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Crhr2Q60748 411 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 VclQ64727 1066 aaKnown RBP9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Pwwp2aQ69Z61 730 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Mfsd13aQ6PDE8 519 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Fgl1Q71KU9 314 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Shc2Q8BMC3 573 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Padi6Q8K3V4 682 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Olfr1417Q8VGJ6 315 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tmed9Q99KF1 235 aaKnown RBP9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Lrrc69Q9D9Q0 347 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Csnk1dQ9DC28 415 aa9.31□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Scn5aQ9JJV9 2019 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm21865A0A087WRL2 222 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Nxpe3B9EKK6 559 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Xkr6E9Q6C8 638 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Sypl1O09117 261 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 RngttO55236 597 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Kcnj1O88335 372 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tp63O88898 680 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Fgf18O89101 207 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Dsc1P55849 886 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Inpp5jP59644 1003 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ctnnb1Q02248 781 aaKnown RBP9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Zfp41Q02526 198 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Cd244Q07763 397 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Elmod1Q3V1U8 326 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 BadQ61337 204 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Hsd3b5Q61694 373 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 WdcpQ6NV72 663 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Nadsyn1Q711T7 725 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Enpp6Q8BGN3 440 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ppwd1Q8CEC6 646 aaKnown RBP9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Nxnl1Q8VC33 217 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Olfr853Q8VGG6 305 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Dus3lQ91XI1 637 aaKnown RBP9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Elmod3Q91YP6 381 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ly6kQ9CWP4 154 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 AcoxlQ9DBS4 632 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Cdc20Q9JJ66 499 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Zfp534A2A7A1 661 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 4930595M18RikA2RRY9 829 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Catsperg1E9Q355 1151 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Olfr640E9Q7P5 314 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Olfr605E9Q838 314 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 5730507C01RikJ3QPX0 416 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Fzd1O70421 642 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Bmp7P23359 430 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Rpl3P27659 403 aaKnown RBP9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Sec1P97353 368 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Bcas1Q80YN3 633 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gpr26Q8BZA7 337 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Nlrp10Q8CCN1 673 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gatad2aQ8CHY6 629 aaKnown RBP9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Oard1Q8R5F3 152 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Wdr74Q8VCG3 384 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 TapbplQ8VD31 451 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Camk1gQ91VB2 477 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Bcl7aQ9CXE2 210 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 MtpapQ9D0D3 585 aaKnown RBP9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 PaicsQ9DCL9 425 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Pdzk1Q9JIL4 519 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Rgs6Q9Z2H2 472 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm5141A0A0J9YUW3 581 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Rex2A2AWF2 685 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm13285B1AYI3 182 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm13275B1AYI8 182 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm3149E9PW52 257 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Vmn2r106E9PY92 862 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm597E9Q8J5 896 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Galnt9G3X942 604 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm8362K7N6Y6 257 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 GlaP51569 419 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ube2e3P52483 207 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Cdkl4Q3TZA2 342 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gdi2Q61598 445 aaKnown RBP9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Lasp1Q61792 263 aaKnown RBP9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 BC080695Q66JY9 481 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 C1qtnf6Q6IR41 264 aa9.3□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms