RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 DcnP28654 354 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Pou3f2P31360 445 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Nsg2P47759 171 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Tia1P52912 386 aaKnown RBP12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 TigitP86176 249 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Sec1P97353 368 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Ubxn2bQ0KL01 331 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Ccdc106Q3ULM0 279 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 C1orf109Q499E6 217 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Havcr1Q5QNS5 305 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 AktipQ64362 292 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Ces5aQ6AW46 575 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Trim45Q6PFY8 580 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Lamp3Q7TST5 411 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Dtd2Q8BHA3 168 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Cadm2Q8BLQ9 435 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 C1raQ8CG16 707 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Mapre2Q8R001 326 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Slc22a22Q8R0S9 554 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr1033Q8VFK5 310 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Dus3lQ91XI1 637 aaKnown RBP12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Use1Q9CQ56 270 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Naalad2Q9CZR2 740 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Csnk1dQ9DC28 415 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Adam21Q9JI76 729 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Sphk2Q9JIA7 617 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 PrepQ9QUR6 710 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Otud4B2RRE7 1107 aaKnown RBP12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm8180E9PXN0 145 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Vmn2r7E9PYL5 915 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Ccdc7bE9Q9Y3 381 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Spata31d1cE9QAF1 853 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 AF366264G3X9P9 502 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Sult3a2G5E904 293 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm8926L7MUE8 181 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Rem1O35929 297 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Tcea1P10711 301 aaKnown RBP12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Cers1P27545 350 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 AcadmP45952 421 aaKnown RBP12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Zfp974Q3UVF6 752 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Ripk1Q60855 656 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr1045Q7TR80 315 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Zc3hav1lQ8BFR1 296 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Ankrd9Q8BH83 326 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Vwa1Q8R2Z5 415 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Acot7Q91V12 381 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Mospd2Q9CWP6 518 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Wdr73Q9CWR1 371 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 RtcAQ9D7H3 366 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Ntn4Q9JI33 628 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 ReckQ9Z0J1 971 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Mfsd13bA0A1L1SUA2 455 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Catsperg1E9Q355 1151 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr549E9Q542 316 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Vmn1r58G3X9U3 310 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Zfp871G5E905 615 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm20695H3BLK7 282 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 P01675 107 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 P01676 107 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 P01677 107 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 P01678 107 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 GypaP14220 168 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Hmgn1P18608 96 aaKnown RBP12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Lsp1P19973 330 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Htr7P32304 448 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Fabp7P51880 132 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Rin3P59729 980 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Slc10a2P70172 348 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Cds1P98191 461 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Cr1lQ64735 483 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr744Q7TRM0 323 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Rgs8Q8BXT1 180 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Ska3Q8C263 411 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Zfp57Q8C6P8 421 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm5591Q8CDK1 855 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Pphln1Q8K2H1 381 aaKnown RBP12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Fmo2Q8K2I3 535 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Rbm12Q8R4X3 992 aaKnown RBP12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 NclnQ8VCM8 563 aaKnown RBP12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Ogfrl1Q8VE52 464 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr811Q8VFI1 319 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr1020Q8VFK7 317 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr1346Q8VGH6 313 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Glyr1Q922P9 546 aaKnown RBP12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Alyref2Q9JJW6 218 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Oaz3Q9R109 243 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Sema4gQ9WUH7 837 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Itgb6Q9Z0T9 787 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 PtprdQ64487 1912 aa12.82□□□□□ -0.36
Nup88-201ENSMUST00000035283 Plxnb3Q9QY40 1902 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Igkv5-39A0A0G2JDV4 115 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm6401L7N2C0 213 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Kpna3O35344 521 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Klkb1P26262 638 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 VaspP70460 375 aaKnown RBP12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Fam47cQ14BE7 430 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Pde12Q3TIU4 608 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 NarsQ8BP47 559 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Bbs4Q8C1Z7 520 aa12.81□□□□□ -0.36
Nup88-201ENSMUST00000035283 Stx19Q8R1Q0 292 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms