RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Aldh9a1Q9JLJ2 494 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Sema4gQ9WUH7 837 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Ltbp1Q8CG19 1712 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Cd300ld4A2A7W1 245 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 A6H6Q4 206 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Gm7970L7N271 213 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Gm7980L7N471 213 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 CcnkO88874 554 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 HbaP01942 142 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Sstr2P30875 369 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 CrhbpQ60571 322 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Adam2Q60718 735 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Ripk1Q60855 656 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 OclnQ61146 521 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Cd300ld3Q6SJQ5 245 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Olfr594Q7TRR4 311 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Lamp3Q7TST5 411 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Katnb1Q8BG40 658 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Vmn1r192Q8K4C9 300 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 FlcnQ8QZS3 579 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Tmem268Q8R239 342 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 AspaQ8R3P0 312 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Wdr61Q9ERF3 305 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Kcne5Q9QZ26 143 aa10.85□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Lamb2Q61292 1799 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Zfp383A0A087WRR7 490 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Alx3O70137 343 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 VaspP70460 375 aaKnown RBP10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 MlanaQ2TA50 113 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Usp17laQ61068 526 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Znf235Q61116 645 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 F12Q80YC5 597 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Cfap20Q8BTU1 193 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Olfr54Q8VFE6 313 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Olfr815Q8VFU0 316 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Olfr345Q8VGK4 311 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 DlstQ9D2G2 454 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Olfr701Q9D3U9 316 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Slc38a3Q9DCP2 505 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Vmn2r97K7N6Z2 861 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Cnih2O35089 160 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Acvr1P37172 509 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Hoxd13P70217 339 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Gm5460Q3UQ97 254 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Slc39a9Q8BFU1 308 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Col25a1Q99MQ5 666 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 GatmQ9D964 423 aaKnown RBP10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 PrepQ9QUR6 710 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Tinf2Q9QXG9 341 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 NfkbiaQ9Z1E3 314 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Gm21904A8HG57 180 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Itga10E9Q6R1 1167 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Gm21866J3QMH4 180 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Dgcr6O35347 198 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 TrhrP21761 393 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Ptger4P32240 513 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Nat2P50295 290 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Dpf3P58269 378 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Snrpd1P62315 119 aaKnown RBP10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Taf1aP97357 453 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Sap25Q1EHW4 186 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Pydc3Q3V3Q4 588 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Opa3Q505D7 179 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Mup20Q5FW60 181 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Alkbh2Q6P6J4 239 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Acp6Q8BP40 418 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Phtf2Q8CB19 747 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Dnajc22Q8CHS2 339 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Asf1aQ9CQE6 204 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 CenpnQ9CZW2 337 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 RhouQ9EQT3 261 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Megf6Q80V70 1572 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Gm12695A2AGB2 545 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 4930402K13RikB1AW18 415 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Gm7951E9Q0A2 213 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Gm6482F6YHC1 213 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Gm17124F6ZIG1 213 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 NsmafO35242 920 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Etv2P41163 335 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Rab8bP61028 207 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Atf4Q06507 349 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Olfr681Q3SXH8 315 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Foxk2Q3UCQ1 651 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Diras2Q5PR73 199 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 PfplQ5RKV8 702 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Tmem199Q5SYH2 208 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 PmlQ60953 885 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Il10rbQ61190 349 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Lag3Q61790 521 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Pou4f3Q63955 338 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Kcnk12Q76M80 430 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 IpmkQ7TT16 396 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Znf473Q8BI67 892 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Gper1Q8BMP4 375 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 LaynQ8C351 381 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Acat2Q8CAY6 397 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 CenpiQ8K1K4 746 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 TapbplQ8VD31 451 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Olfr679Q8VGV0 315 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Ift43Q9DA69 206 aa10.84□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 51.3 ms