RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Zfp868Q3UTQ6 422 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Mfsd13aQ6PDE8 519 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Znf569Q80W31 679 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Q8BGK9 164 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Zbtb46Q8BID6 600 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Rgs8Q8BXT1 180 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Cyp51a1Q8K0C4 503 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Slc22a22Q8R0S9 554 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 AmnQ99JB7 458 aaKnown RBP15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Prps2Q9CS42 318 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Adam21Q9JI76 729 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Alyref2Q9JJW6 218 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 AccsA2AIG8 502 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Xlr5bA2BI50 236 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Olfr742A2RTP5 311 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Nlgn4lB0F2B4 945 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Psmb5O55234 264 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Mup4P11590 178 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Hoxc5P32043 222 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Epb42P49222 691 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ica1P97411 478 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Plpp4Q0VBU9 271 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Lats2Q7TSJ6 1042 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 CpmQ80V42 443 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Csgalnact1Q8BJQ9 530 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 PisdQ8BSF4 406 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Nlrp10Q8CCN1 673 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Q8K207 121 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Camk1Q91YS8 374 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Rps19Q9CZX8 145 aaKnown RBP15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Creb3l4Q9D2A5 370 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 TesminQ9WTJ6 475 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ramp2Q9WUP0 189 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Col6a3E9PWQ3 3284 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 CN725425A0A087WRU1 652 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Gm3476K7N6V0 257 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 P01665 111 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 P01666 111 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ap1s1P61967 158 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Upf3aQ3ULJ3 422 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Fam189a1Q6A044 515 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Megf11Q80T91 1091 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Tctn1Q8BZ64 593 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Fbxw14Q8C2Y5 466 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Tmem259Q8CIV2 574 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Pphln1Q8K2H1 381 aaKnown RBP15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ntmt1Q8R2U4 223 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Camkk1Q8VBY2 505 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Olfr48Q8VGN4 301 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Fam136b-psA0A140T8T1 138 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ttll3A4Q9E5 927 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Lrr1D3YY91 422 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Hps1O08983 704 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 HpnO35453 436 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 ChadO55226 358 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 CenpcP49452 906 aaKnown RBP15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ap2m1P84091 435 aaKnown RBP15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Defb23Q30KP0 166 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Fblim1Q71FD7 375 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Kcnk12Q76M80 430 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Mon1bQ8BMQ8 553 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Lcmt2Q8BYR1 686 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Prokr2Q8K458 381 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Asb17Q8VHP9 295 aa15.49■□□□□ 0.07
Trim28-201ENSMUST00000005705 Olfr59B1ARL3 323 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Prss56F2YMG0 604 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Gm7945F6QI24 236 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Gosr2O35166 212 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Wnt3P17553 355 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Rad52P43352 420 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Slc10a2P70172 348 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Hsd17b3P70385 305 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Cxcr4P70658 359 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Anxa4P97429 319 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 CrtamQ149L7 389 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Rars2Q3U186 578 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Trim45Q6PFY8 580 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 N6amt1Q6SKR2 214 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Katnb1Q8BG40 658 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Zadh2Q8BGC4 377 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Fam3cQ91VU0 227 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Slc25a46Q9CQS4 418 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ptges3Q9R0Q7 160 aaKnown RBP15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 RlfA2A7F4 1918 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 A430033K04RikE9Q8G5 680 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Cacng1O70578 223 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Stard6P59096 233 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Mapk1P63085 358 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 TepsinQ3U3N6 573 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Slc27a5Q4LDG0 689 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Nr0b2Q62227 260 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ugt2a2Q6PDD0 528 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Osgepl1Q6PEB4 414 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Tmc6Q7TN60 810 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Olfr1308Q7TQX0 320 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Olfr735Q7TRM4 354 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Phf24Q80TL4 400 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Enpp6Q8BGN3 440 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Mief1Q8BGV8 463 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ptpn7Q8BUM3 359 aa15.48■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 72.6 ms