RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 SPDYE7PQ495Y7 208 aa15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 ATAD3CQ5T2N8 411 aa15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 HIST2H2AA3Q6FI13 130 aa15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 REEP3Q6NUK4 255 aa15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 WASH2PQ6VEQ5 465 aa15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 C9orf43Q8TAL5 461 aaPredicted RBP15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 SLC5A11Q8WWX8 675 aa15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 EXOSC8Q96B26 276 aaKnown RBP15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 REPS1Q96D71 796 aa15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 UCK2Q9BZX2 261 aa15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 ZNF221Q9UK13 617 aa15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 CARD8Q9Y2G2 431 aa15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 WNT6Q9Y6F9 365 aa15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 ALPK3Q96L96 1907 aa15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 PLD2O14939 933 aa15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 SLITRK5O94991 958 aa15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 CYP17A1P05093 508 aa15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 RACK1P63244 317 aaKnown RBP15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 ZNF770Q6IQ21 691 aaPredicted RBP15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 LIPIQ6XZB0 460 aa15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 VN1R2Q8NFZ6 395 aa15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 OR9Q1Q8NGQ5 310 aa15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 ASB15Q8WXK1 588 aa15.74■□□□□ 0.11
HNRNPU-228ENST00000640306 TLX2O43763 284 aaPredicted RBP15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 KRT75O95678 551 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 XKP51811 444 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 MRPS15P82914 257 aaKnown RBP15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 ZNF91Q05481 1191 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 TCTN3Q6NUS6 607 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 CASP12Q6UXS9 341 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 TMPRSS11AQ6ZMR5 421 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 C11orf96Q7Z7L8 435 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 DDX53Q86TM3 631 aaKnown RBP15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 LAS2Q8IYD9 372 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 PIK3R3Q92569 461 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 SLC6A18Q96N87 628 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 F2RL3Q96RI0 385 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 TAPBPLQ9BX59 468 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 TSSK6Q9BXA6 273 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 MVB12BQ9H7P6 319 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 DYRK4Q9NR20 520 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 CDRT1O95170 752 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 CSF2P04141 144 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 POLR2EP19388 210 aaKnown RBP15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 HTR3AP46098 478 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 PDE7AQ13946 482 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 DCST1Q5T197 706 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 NXPE4Q6UWF7 544 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 OR5D16Q8NGK9 328 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 TIFAQ96CG3 184 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 METTL2AQ96IZ6 378 aaKnown RBP15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 TTYH2Q9BSA4 534 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 POLR2J3Q9H1A7 115 aaKnown RBP15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 SEMA3GQ9NS98 782 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 REV1Q9UBZ9 1251 aa15.73■□□□□ 0.11
HNRNPU-228ENST00000640306 A0A1W2PQ09 198 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 FEZF1A0PJY2 475 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 FAM47E-STBD1D6RA91 191 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 M0R3H8 397 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 PSMA1P25786 263 aaKnown RBP15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 ELAVL4P26378 380 aaKnown RBP15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 HMGA2P52926 109 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 ZNF79Q15937 498 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 ZNF517Q6ZMY9 492 aaPredicted RBP15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 CCDC80Q76M96 950 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 VN1R5Q7Z5H4 357 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 TECPR1Q7Z6L1 1165 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 OR6F1Q8NGZ6 308 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 KLHL6Q8WZ60 621 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 CXorf40BQ96DE9 158 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 EFCAB11Q9BUY7 163 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 MYNNQ9NPC7 610 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 WBP1LQ9NX94 342 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 CNOT2Q9NZN8 540 aaKnown RBP15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 CRNNQ9UBG3 495 aaPredicted RBP15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 PCYT1BQ9Y5K3 369 aaPredicted RBP15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 NOX1Q9Y5S8 564 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 SNX4O95219 450 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 SCG5P05408 212 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 ALPPL2P10696 532 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 OSMP13725 252 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 CD72P21854 359 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 RFX2P48378 723 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 DGKGP49619 791 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 CAV3P56539 151 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 SLAMF1Q13291 335 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 TEAD2Q15562 447 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 RAET1GQ6H3X3 334 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 ERAP2Q6P179 960 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 COMTD1Q86VU5 262 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 OR9A1PQ8NGU1 263 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 IRF7Q92985 503 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 KCNK12Q9HB15 430 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 CCDC177Q9NQR7 707 aaPredicted RBP15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 TOR4AQ9NXH8 423 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 IL36AQ9UHA7 158 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 MAPRE3Q9UPY8 281 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 ASF1AQ9Y294 204 aa15.72■□□□□ 0.11
HNRNPU-228ENST00000640306 SH3D21A4FU49 640 aa15.71■□□□□ 0.11
HNRNPU-228ENST00000640306 ANHXE9PGG2 379 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms