RNA–Protein interactions for RNA: ENST00000640027.1

MED17-222, Transcript of mediator complex subunit 17, human

TSL 5

Gene MED17, Length 4,569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-222	ENST00000640027	IGSF8	Q969P0	613 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	FZD3	Q9NPG1	666 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	LTBP3	Q9NS15	1303 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	SMIM30	A4D0T7	59 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	SDC3	O75056	442 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	IL1RN	P18510	177 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	DNAJB1	P25685	340 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	OTX2	P32243	289 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	OR2B6	P58173	313 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	RPS3A	P61247	264 aa	Known RBP	13.34	□□□□□ -0.27
MED17-222	ENST00000640027	DSC1	Q08554	894 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	NKAPL	Q5M9Q1	402 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	RTP2	Q5QGT7	225 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	ZNF648	Q5T619	568 aa	Predicted RBP	13.34	□□□□□ -0.27
MED17-222	ENST00000640027	TSACC	Q96A04	125 aa	Predicted RBP	13.34	□□□□□ -0.27
MED17-222	ENST00000640027	ZNF382	Q96SR6	550 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	STRA6	Q9BX79	667 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	SRA1	Q9HD15	236 aa	Known RBP	13.34	□□□□□ -0.27
MED17-222	ENST00000640027	PTTG2	Q9NZH5	202 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	PCDH10	Q9P2E7	1040 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	CLEC4E	Q9ULY5	219 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	SEMA4F	O95754	770 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	SYP	P08247	313 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	THEGL	P0DJG4	465 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	UQCRC1	P31930	480 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	GALK2	Q01415	458 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	ARSK	Q6UWY0	536 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	LAS2	Q8IYD9	372 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	PROKR1	Q8TCW9	393 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	DOK4	Q8TEW6	326 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	ZBTB26	Q9HCK0	441 aa		13.34	□□□□□ -0.27
MED17-222	ENST00000640027	E2F3	O00716	465 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	DFNA5	O60443	496 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	PPM1B	O75688	479 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	CPNE6	O95741	557 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027		P04436	131 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	CD9	P21926	228 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	SOX4	Q06945	474 aa	Predicted RBP	13.33	□□□□□ -0.28
MED17-222	ENST00000640027	ZNF678	Q5SXM1	525 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	GLT8D1	Q68CQ7	371 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	SLC27A4	Q6P1M0	643 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	IMP4	Q96G21	291 aa	Known RBP	13.33	□□□□□ -0.28
MED17-222	ENST00000640027	PEBP4	Q96S96	227 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.33	□□□□□ -0.28
MED17-222	ENST00000640027	SLC17A9	Q9BYT1	436 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	CIT	O14578	2027 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027		M0R129	80 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	RTCA	O00442	366 aa	Known RBP	13.33	□□□□□ -0.28
MED17-222	ENST00000640027	CA3	P07451	260 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	GSTT2	P0CG29	244 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	NTHL1	P78549	312 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	HSD11B2	P80365	405 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	HHEX	Q03014	270 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	ZNF709	Q8N972	641 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	OR10T2	Q8NGX3	314 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	ITPA	Q9BY32	194 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	RPF2	Q9H7B2	306 aa	Known RBP	13.33	□□□□□ -0.28
MED17-222	ENST00000640027	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.33	□□□□□ -0.28
MED17-222	ENST00000640027	PCDHGA6	Q9Y5G7	932 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	DDX60	Q8IY21	1712 aa	Known RBP	13.33	□□□□□ -0.28
MED17-222	ENST00000640027	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	FAM72C	H0Y354	149 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	PLAT	P00750	562 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	C6	P13671	934 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	PGC	P20142	388 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	UQCRC2	P22695	453 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	GNRHR	P30968	328 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	TIA1	P31483	386 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
MED17-222	ENST00000640027	RBMX	P38159	391 aa	Known RBP	13.33	□□□□□ -0.28
MED17-222	ENST00000640027	E2F1	Q01094	437 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	FAM72A	Q5TYM5	149 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	DCAF12L1	Q5VU92	463 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	KIAA1614	Q5VZ46	1190 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	FAM72D	Q6L9T8	149 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	FAM72B	Q86X60	149 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	BOLL	Q8N9W6	283 aa	Known RBP	13.33	□□□□□ -0.28
MED17-222	ENST00000640027	POGLUT1	Q8NBL1	392 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	PEX13	Q92968	403 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	ZNF471	Q9BX82	626 aa	Predicted RBP	13.33	□□□□□ -0.28
MED17-222	ENST00000640027	ARHGAP39	Q9C0H5	1083 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	DPAGT1	Q9H3H5	408 aa		13.33	□□□□□ -0.28
MED17-222	ENST00000640027	C1orf226	A1L170	272 aa		13.32	□□□□□ -0.28
MED17-222	ENST00000640027	KLHL33	A6NCF5	533 aa		13.32	□□□□□ -0.28
MED17-222	ENST00000640027		K7ERQ8	282 aa		13.32	□□□□□ -0.28
MED17-222	ENST00000640027	EMC8	O43402	210 aa		13.32	□□□□□ -0.28
MED17-222	ENST00000640027	GSR	P00390	522 aa		13.32	□□□□□ -0.28
MED17-222	ENST00000640027	MRPL3	P09001	348 aa	Known RBP	13.32	□□□□□ -0.28
MED17-222	ENST00000640027	OXTR	P30559	389 aa		13.32	□□□□□ -0.28
MED17-222	ENST00000640027	TBPL1	P62380	186 aa		13.32	□□□□□ -0.28
MED17-222	ENST00000640027	BNIP3	Q12983	259 aa		13.32	□□□□□ -0.28
MED17-222	ENST00000640027	ABHD17B	Q5VST6	288 aa		13.32	□□□□□ -0.28
MED17-222	ENST00000640027	KCTD9	Q7L273	389 aa		13.32	□□□□□ -0.28
MED17-222	ENST00000640027	SPAG16	Q8N0X2	631 aa		13.32	□□□□□ -0.28
MED17-222	ENST00000640027	PPP1R14B	Q96C90	147 aa		13.32	□□□□□ -0.28
MED17-222	ENST00000640027	KATNBL1	Q9H079	304 aa		13.32	□□□□□ -0.28
MED17-222	ENST00000640027	TM9SF3	Q9HD45	589 aa		13.32	□□□□□ -0.28
MED17-222	ENST00000640027	TMEM14A	Q9Y6G1	99 aa		13.32	□□□□□ -0.28
MED17-222	ENST00000640027	STYXL1	Q9Y6J8	313 aa		13.32	□□□□□ -0.28
MED17-222	ENST00000640027	VSTM2B	A6NLU5	285 aa		13.32	□□□□□ -0.28
MED17-222	ENST00000640027	TTLL8	A6PVC2	850 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms