RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 OR1F1O43749 312 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 HOXB3P14651 431 aaPredicted RBP14.32□□□□□ -0.12
TRIM3-215ENST00000639856 ITGA2P17301 1181 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 ALDH9A1P49189 494 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 DSTNP60981 165 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 CSNK1G2P78368 415 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 SLC35A2P78381 396 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 PRDX1Q06830 199 aaKnown RBP14.32□□□□□ -0.12
TRIM3-215ENST00000639856 NFATC3Q12968 1075 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 MAD2L1BPQ15013 274 aaPredicted RBP14.32□□□□□ -0.12
TRIM3-215ENST00000639856 LAIR1Q6GTX8 287 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 ABI3BPQ7Z7G0 1075 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 NUDT13Q86X67 352 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 GIPC3Q8TF64 312 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 RGMAQ96B86 450 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 THAP11Q96EK4 314 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 DGCR6LQ9BY27 220 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 GPN2Q9H9Y4 310 aaPredicted RBP14.32□□□□□ -0.12
TRIM3-215ENST00000639856 SLAMF7Q9NQ25 335 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 TMEM184CQ9NVA4 438 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 SCN3BQ9NY72 215 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 KLF15Q9UIH9 416 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 ANGPT4Q9Y264 503 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 HS3ST3A1Q9Y663 406 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 DGKBQ9Y6T7 804 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 COL6A3P12111 3177 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 A6NCN8 305 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 PRAMEF25A6NGN4 478 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 PDPK1O15530 556 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 NDUFS4O43181 175 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 LCMT2O60294 686 aaKnown RBP14.32□□□□□ -0.12
TRIM3-215ENST00000639856 STATHP02808 62 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 DDX5P17844 614 aaKnown RBP14.32□□□□□ -0.12
TRIM3-215ENST00000639856 CD6P30203 668 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 GSTM5P46439 218 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 STT3AP46977 705 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 CCR5P51681 352 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 MAPK10P53779 464 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 MANFP55145 182 aaKnown RBP14.32□□□□□ -0.12
TRIM3-215ENST00000639856 YPEL5P62699 121 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 RPP38P78345 283 aaKnown RBP14.32□□□□□ -0.12
TRIM3-215ENST00000639856 EMX1Q04741 257 aaPredicted RBP14.32□□□□□ -0.12
TRIM3-215ENST00000639856 FBXL6Q8N531 539 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 DEFB119Q8N690 84 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 OR4E2Q8NGC2 313 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 GEMIN6Q8WXD5 167 aaKnown RBP14.32□□□□□ -0.12
TRIM3-215ENST00000639856 NEURL3Q96EH8 262 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 HRASLS5Q96KN8 279 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 RAB11FIP5Q9BXF6 653 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 ABCG4Q9H172 646 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 NEUROD4Q9HD90 331 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 SLC6A20Q9NP91 592 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 PRDM6Q9NQX0 595 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 AASSQ9UDR5 926 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 KLHL20Q9Y2M5 609 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 CCDC88CQ9P219 2028 aa14.31□□□□□ -0.12
TRIM3-215ENST00000639856 MDC1Q14676 2089 aaKnown RBP14.31□□□□□ -0.12
TRIM3-215ENST00000639856 FAM170BA6NMN3 283 aa14.31□□□□□ -0.12
TRIM3-215ENST00000639856 PRICKLE3O43900 615 aaPredicted RBP14.31□□□□□ -0.12
TRIM3-215ENST00000639856 CELA2BP08218 269 aaPredicted RBP14.31□□□□□ -0.12
TRIM3-215ENST00000639856 FRKP42685 505 aaPredicted RBP14.31□□□□□ -0.12
TRIM3-215ENST00000639856 RABIFP47224 123 aa14.31□□□□□ -0.12
TRIM3-215ENST00000639856 EMP3P54852 163 aa14.31□□□□□ -0.12
TRIM3-215ENST00000639856 PROX2Q3B8N5 592 aa14.31□□□□□ -0.12
TRIM3-215ENST00000639856 SAXO2Q658L1 398 aa14.31□□□□□ -0.12
TRIM3-215ENST00000639856 CEACAM20Q6UY09 585 aa14.31□□□□□ -0.12
TRIM3-215ENST00000639856 ARMC8Q8IUR7 673 aa14.31□□□□□ -0.12
TRIM3-215ENST00000639856 CCDC71Q8IV32 467 aaPredicted RBP14.31□□□□□ -0.12
TRIM3-215ENST00000639856 SFTPA2Q8IWL1 248 aa14.31□□□□□ -0.12
TRIM3-215ENST00000639856 OR4C15Q8NGM1 316 aa14.31□□□□□ -0.12
TRIM3-215ENST00000639856 FKBP10Q96AY3 582 aa14.31□□□□□ -0.12
TRIM3-215ENST00000639856 ZNF764Q96H86 408 aaPredicted RBP14.31□□□□□ -0.12
TRIM3-215ENST00000639856 FEVQ99581 238 aa14.31□□□□□ -0.12
TRIM3-215ENST00000639856 FUNDC2Q9BWH2 189 aa14.31□□□□□ -0.12
TRIM3-215ENST00000639856 KIR3DX1Q9H7L2 352 aa14.31□□□□□ -0.12
TRIM3-215ENST00000639856 WARS2Q9UGM6 360 aaKnown RBP14.31□□□□□ -0.12
TRIM3-215ENST00000639856 ADAM29Q9UKF5 820 aa14.31□□□□□ -0.12
TRIM3-215ENST00000639856 FBXL21Q9UKT6 434 aa14.31□□□□□ -0.12
TRIM3-215ENST00000639856 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.31□□□□□ -0.12
TRIM3-215ENST00000639856 HEBP2Q9Y5Z4 205 aa14.31□□□□□ -0.12
TRIM3-215ENST00000639856 COLEC10Q9Y6Z7 277 aa14.31□□□□□ -0.12
TRIM3-215ENST00000639856 USP34Q70CQ2 3546 aa14.31□□□□□ -0.12
TRIM3-215ENST00000639856 IGHV1OR15-9A0A0B4J2B8 117 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 TMPRSS11DO60235 418 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 PRAMEF10O60809 474 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 CLEC3AO75596 197 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 INMTO95050 263 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 CD247P20963 164 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 SLC19A1P41440 591 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 GP2P55259 537 aaKnown RBP14.3□□□□□ -0.12
TRIM3-215ENST00000639856 PCBP4P57723 403 aaKnown RBP14.3□□□□□ -0.12
TRIM3-215ENST00000639856 SPIBQ01892 262 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 LRRC32Q14392 662 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 REEP3Q6NUK4 255 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 WASH2PQ6VEQ5 465 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 UBE3DQ7Z6J8 389 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 SIX5Q8N196 739 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 OR10G2Q8NGC3 310 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 FAR1Q8WVX9 515 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 LCN9Q8WX39 176 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms