RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	RGMA	Q96B86	450 aa		13.59	□□□□□ -0.23
TARDBP-231	ENST00000639599	REPS1	Q96D71	796 aa		13.59	□□□□□ -0.23
TARDBP-231	ENST00000639599	RPF2	Q9H7B2	306 aa	Known RBP	13.59	□□□□□ -0.23
TARDBP-231	ENST00000639599	SMYD2	Q9NRG4	433 aa		13.59	□□□□□ -0.23
TARDBP-231	ENST00000639599	WHRN	Q9P202	907 aa		13.59	□□□□□ -0.23
TARDBP-231	ENST00000639599	KCNN3	Q9UGI6	736 aa		13.59	□□□□□ -0.23
TARDBP-231	ENST00000639599	UTP11	Q9Y3A2	253 aa	Known RBP	13.59	□□□□□ -0.23
TARDBP-231	ENST00000639599	CLDN16	Q9Y5I7	305 aa		13.59	□□□□□ -0.23
TARDBP-231	ENST00000639599	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	13.59	□□□□□ -0.23
TARDBP-231	ENST00000639599	CELSR2	Q9HCU4	2923 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	TRGV5	A0A0B4J1U4	118 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	TCRBV9S1A1T	A0A576	114 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	TMEM200C	A6NKL6	621 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	CXorf49	A8MYA2	514 aa	Predicted RBP	13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	AQP7	O14520	342 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	FGF17	O60258	216 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	SUSD5	O60279	629 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	HCN1	O60741	890 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	KERA	O60938	352 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	LTA4H	P09960	611 aa	Known RBP	13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	CCL3	P10147	92 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	GFAP	P14136	432 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	GABRA1	P14867	456 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	ALOX15	P16050	662 aa	Predicted RBP	13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	CD22	P20273	847 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	CRABP2	P29373	138 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	SERPINB3	P29508	390 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	MPEG1	Q2M385	716 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	C1orf185	Q5T7R7	199 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	SLC22A10	Q63ZE4	541 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	OR4C11	Q6IEV9	310 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	GRHL2	Q6ISB3	625 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	CYP20A1	Q6UW02	462 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	GPR180	Q86V85	440 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	OR4N5	Q8IXE1	308 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	DMRTC2	Q8IXT2	367 aa	Predicted RBP	13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	TAGAP	Q8N103	731 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	SLC15A4	Q8N697	577 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	TANK	Q92844	425 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	SENP5	Q96HI0	755 aa	Predicted RBP	13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	ERP44	Q9BS26	406 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	TTYH2	Q9BSA4	534 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	OR51B5	Q9H339	312 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	ACTR8	Q9H981	624 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	GRPEL1	Q9HAV7	217 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	TUBA8	Q9NY65	449 aa	Predicted RBP	13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	ATG4B	Q9Y4P1	393 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	LIPG	Q9Y5X9	500 aa		13.58	□□□□□ -0.24
TARDBP-231	ENST00000639599	FAM159B	A6NKW6	160 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	CAPN14	A8MX76	684 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	UBXN8	O00124	270 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	TOX	O94900	526 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	GLS	O94925	669 aa	Predicted RBP	13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	ETHE1	O95571	254 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	IGHG3	P01860	377 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	HOXD4	P09016	255 aa	Predicted RBP	13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	PIGA	P37287	484 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	MRPS25	P82663	173 aa	Known RBP	13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	TNFRSF17	Q02223	184 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	CAV1	Q03135	178 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	FOLH1	Q04609	750 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	ZKSCAN8	Q15776	578 aa	Predicted RBP	13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	SLC25A35	Q3KQZ1	300 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	PIGG	Q5H8A4	983 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	PRAMEF20	Q5VT98	475 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	HLA-DQA1	Q5Y7H0	255 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	KLC3	Q6P597	504 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	RNF111	Q6ZNA4	994 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	LAS2	Q8IYD9	372 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	TEX9	Q8N6V9	391 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	OR7G3	Q8NG95	312 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	ZNF721	Q8TF20	911 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	PPWD1	Q96BP3	646 aa	Known RBP	13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	SPACA9	Q96E40	222 aa	Predicted RBP	13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	DOHH	Q9BU89	302 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	RAB17	Q9H0T7	212 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	KCNF1	Q9H3M0	494 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	LYAR	Q9NX58	379 aa	Known RBP	13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	TNFRSF10D	Q9UBN6	386 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	EDAR	Q9UNE0	448 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	PCDHGA11	Q9Y5H2	935 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599	HRH3	Q9Y5N1	445 aa		13.57	□□□□□ -0.24
TARDBP-231	ENST00000639599		A0A087X1B8	175 aa		13.56	□□□□□ -0.24
TARDBP-231	ENST00000639599	PRAMEF4	O60810	478 aa		13.56	□□□□□ -0.24
TARDBP-231	ENST00000639599	SCEL	O95171	688 aa		13.56	□□□□□ -0.24
TARDBP-231	ENST00000639599	WISP3	O95389	354 aa	Predicted RBP	13.56	□□□□□ -0.24
TARDBP-231	ENST00000639599	TBX6	O95947	436 aa	Predicted RBP	13.56	□□□□□ -0.24
TARDBP-231	ENST00000639599	PEX19	P40855	299 aa		13.56	□□□□□ -0.24
TARDBP-231	ENST00000639599	CASP2	P42575	452 aa		13.56	□□□□□ -0.24
TARDBP-231	ENST00000639599	ART1	P52961	327 aa		13.56	□□□□□ -0.24
TARDBP-231	ENST00000639599	HERVK_113	P63132	956 aa		13.56	□□□□□ -0.24
TARDBP-231	ENST00000639599	ERVK-8	P63133	956 aa		13.56	□□□□□ -0.24
TARDBP-231	ENST00000639599	FAM83E	Q2M2I3	478 aa		13.56	□□□□□ -0.24
TARDBP-231	ENST00000639599	KBTBD12	Q3ZCT8	623 aa		13.56	□□□□□ -0.24
TARDBP-231	ENST00000639599	EMC4	Q5J8M3	183 aa		13.56	□□□□□ -0.24
TARDBP-231	ENST00000639599	DEPDC1	Q5TB30	811 aa		13.56	□□□□□ -0.24
TARDBP-231	ENST00000639599	PRAMEF9	Q5VWM5	478 aa		13.56	□□□□□ -0.24
TARDBP-231	ENST00000639599	FBXW10	Q5XX13	1052 aa		13.56	□□□□□ -0.24
TARDBP-231	ENST00000639599	CRYBG3	Q68DQ2	2970 aa		13.56	□□□□□ -0.24

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