RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 ARL11Q969Q4 196 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 DMRTB1Q96MA1 342 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 SAMD11Q96NU1 681 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 BTBD1Q9H0C5 482 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 ENAMQ9NRM1 1142 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 VWA7Q9Y334 891 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 AGAP14A8MT82 685 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 TSPAN6O43657 245 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 PAK4O96013 591 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 ADH1BP00325 375 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 ZNF728P0DKX0 622 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 BPIP17213 487 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 NPY1RP25929 384 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 ITGA7Q13683 1181 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 C2orf15Q8WU43 125 aaKnown RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 DCUN1D4Q92564 292 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 MUCL1Q96DR8 90 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 RBMXL1Q96E39 390 aaKnown RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 PPM1MQ96MI6 270 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 TSSK2Q96PF2 358 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 RNF157Q96PX1 679 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 PKP4Q99569 1192 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 CDC6Q99741 560 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 ZDHHC3Q9NYG2 299 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 AKAP11Q9UKA4 1901 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.8□□□□□ -1.488e-7■■■■□ 21.2
SCN1A-212ENST00000636194 TET3O43151 1660 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 C2orf92A0A1B0GVN3 265 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 XKRY2A2RUG3 117 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 OR6C70A6NIJ9 312 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 SGPL1O95470 568 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 IGHEP01854 428 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 UQCRC2P22695 453 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 BDKRB2P30411 391 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 SREBF1P36956 1147 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 CD163Q86VB7 1156 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 DNAJC22Q8N4W6 341 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 ITFG2Q969R8 447 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 SGCZQ96LD1 299 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 SLC19A3Q9BZV2 496 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 OR2J1Q9GZK6 312 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 SLC25A31Q9H0C2 315 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 AGO3Q9H9G7 860 aaKnown RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 EGFL7Q9UHF1 273 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 A0A1B0GV50 99 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 CBY3A6NI87 242 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 DLGAP1O14490 977 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 MT-CYBP00156 380 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 UGT2B4P06133 528 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 SNTB1Q13884 538 aaKnown RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 MOGQ16653 247 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 CLEC12AQ5QGZ9 265 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 RAET1LQ5VY80 246 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 UNC5AQ6ZN44 842 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 C4orf19Q8IY42 314 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 ZNF606Q8WXB4 792 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 FKBP10Q96AY3 582 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 CMTM3Q96MX0 182 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 NDNQ99608 321 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 CITED2Q99967 270 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 MRPL45Q9BRJ2 306 aaKnown RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 CEP41Q9BYV8 373 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 C1orf21Q9H246 121 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 AGO4Q9HCK5 861 aaKnown RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 ATP10BO94823 1461 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 RNF17Q9BXT8 1623 aaKnown RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 LOC102725191A0A1B0GVB3 256 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 B4DGG1 531 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 DFNA5O60443 496 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 HOXD11P31277 338 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 SCNN1GP51170 649 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 HBG1P69891 147 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 HBG2P69892 147 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 ZNF440Q8IYI8 595 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 DEFB106AQ8N104 65 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 SLC37A3Q8NCC5 494 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 OR11L1Q8NGX0 322 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 OR1S1Q8NH92 325 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 IFI44Q8TCB0 444 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 TAMM41Q96BW9 452 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 RPL10LQ96L21 214 aaKnown RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 PITX2Q99697 317 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 MINDY3Q9H8M7 445 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 KCNQ5Q9NR82 932 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 MAN2C1Q9NTJ4 1040 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 BLOC1S4Q9NUP1 217 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 STEAP1Q9UHE8 339 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 ACSL6Q9UKU0 697 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 YIPF1Q9Y548 306 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 A0A087WWV3 80 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 SULT1C2O00338 296 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 DUX1O43812 170 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 KIAA0556O60303 1618 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 BEST1O76090 585 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 ORM1P02763 201 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 H1F0P07305 194 aaKnown RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 MTHFD2P13995 350 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 CTC1Q2NKJ3 1217 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 ABHD17BQ5VST6 288 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 KDM4DQ6B0I6 523 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms