RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 SMPDL3AQ92484 453 aa9.14□□□□□ -0.95
IGHV3-54-201ENST00000622166 TRIM43Q96BQ3 446 aaPredicted RBP9.14□□□□□ -0.95
IGHV3-54-201ENST00000622166 TMEM19Q96HH6 336 aa9.14□□□□□ -0.95
IGHV3-54-201ENST00000622166 TXNDC15Q96J42 360 aa9.14□□□□□ -0.95
IGHV3-54-201ENST00000622166 LRRC3BQ96PB8 259 aa9.14□□□□□ -0.95
IGHV3-54-201ENST00000622166 IL17FQ96PD4 163 aa9.14□□□□□ -0.95
IGHV3-54-201ENST00000622166 TEFMQ96QE5 360 aaKnown RBP9.14□□□□□ -0.95
IGHV3-54-201ENST00000622166 OR5M11Q96RB7 305 aa9.14□□□□□ -0.95
IGHV3-54-201ENST00000622166 MGLLQ99685 303 aa9.14□□□□□ -0.95
IGHV3-54-201ENST00000622166 CENPOQ9BU64 300 aa9.14□□□□□ -0.95
IGHV3-54-201ENST00000622166 SORBS1Q9BX66 1292 aaKnown RBP9.14□□□□□ -0.95
IGHV3-54-201ENST00000622166 RSPO3Q9BXY4 272 aaPredicted RBP9.14□□□□□ -0.95
IGHV3-54-201ENST00000622166 NEUROD4Q9HD90 331 aa9.14□□□□□ -0.95
IGHV3-54-201ENST00000622166 SLAMF7Q9NQ25 335 aa9.14□□□□□ -0.95
IGHV3-54-201ENST00000622166 ABCB10Q9NRK6 738 aa9.14□□□□□ -0.95
IGHV3-54-201ENST00000622166 ZSCAN32Q9NX65 697 aa9.14□□□□□ -0.95
IGHV3-54-201ENST00000622166 SLC6A14Q9UN76 642 aa9.14□□□□□ -0.95
IGHV3-54-201ENST00000622166 TRAPPC4Q9Y296 219 aa9.14□□□□□ -0.95
IGHV3-54-201ENST00000622166 LSM2Q9Y333 95 aaKnown RBP9.14□□□□□ -0.95
IGHV3-54-201ENST00000622166 PLXND1Q9Y4D7 1925 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 TRBV4-1A0A0J9YWV2 114 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 LOC100506127A0A0U1RQW1 187 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 M0R129 80 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 HMGN4O00479 90 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 ARHGAP33O14559 1287 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 KIAA0513O60268 411 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 KDM1AO60341 852 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 B4GALT2O60909 372 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 MED26O95402 600 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 RPN2P04844 631 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 SCG5P05408 212 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 BCHEP06276 602 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 H1F0P07305 194 aaKnown RBP9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 ELAVL4P26378 380 aaKnown RBP9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 SOX6P35712 828 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 BMPR1AP36894 532 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 CCR8P51685 355 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 CRISP3P54108 245 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 MANFP55145 182 aaKnown RBP9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 GANABQ14697 944 aaKnown RBP9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 SEC23BQ15437 767 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 SSX1Q16384 188 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 GAB4Q2WGN9 574 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 FNDC3BQ53EP0 1204 aaKnown RBP9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 TCEAL5Q5H9L2 206 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 RPS26P11Q5JNZ5 115 aaPredicted RBP9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 SLC25A30Q5SVS4 291 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 DCST1Q5T197 706 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 STEAP3Q658P3 488 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 TCTN3Q6NUS6 607 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 NCCRP1Q6ZVX7 275 aaPredicted RBP9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 AMZ2Q86W34 360 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 TRIM69Q86WT6 500 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 NLGN4XQ8N0W4 816 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 CYP4Z2PQ8N1L4 340 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 LINC00471Q8N535 108 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 PARP16Q8N5Y8 322 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 ANKRD53Q8N9V6 530 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 OR5AR1Q8NGP9 310 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 SPPL3Q8TCT6 385 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 SP7Q8TDD2 431 aaPredicted RBP9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 KLHL6Q8WZ60 621 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 TFGQ92734 400 aaPredicted RBP9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 NXPE3Q969Y0 559 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 RAB7BQ96AH8 199 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 RGMAQ96B86 450 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 EFHD2Q96C19 240 aaPredicted RBP9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 TMEM80Q96HE8 168 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 ZNF354BQ96LW1 612 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 OPALINQ96PE5 141 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 TRNT1Q96Q11 434 aaKnown RBP9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 F2RL3Q96RI0 385 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 ZNF607Q96SK3 696 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 CHCHD6Q9BRQ6 235 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 MENTQ9BUN1 341 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 HDAC8Q9BY41 377 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 C6orf62Q9GZU0 229 aaPredicted RBP9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 DDX31Q9H8H2 851 aaKnown RBP9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 C3orf14Q9HBI5 128 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 IL23AQ9NPF7 189 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 LHX9Q9NQ69 397 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 QPCTLQ9NXS2 382 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 CRNNQ9UBG3 495 aaPredicted RBP9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 SEC14L4Q9UDX3 406 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 ZNF229Q9UJW7 825 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 PLAGL1Q9UM63 463 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 CFL2Q9Y281 166 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 ASF1AQ9Y294 204 aa9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 GPC6Q9Y625 555 aaPredicted RBP9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 TCF20Q9UGU0 1960 aaKnown RBP9.13□□□□□ -0.95
IGHV3-54-201ENST00000622166 DNAH12Q6ZR08 3092 aa9.12□□□□□ -0.95
IGHV3-54-201ENST00000622166 A0A1W2PPV9 198 aa9.12□□□□□ -0.95
IGHV3-54-201ENST00000622166 PRRT4C9JH25 899 aa9.12□□□□□ -0.95
IGHV3-54-201ENST00000622166 NDUFS4O43181 175 aa9.12□□□□□ -0.95
IGHV3-54-201ENST00000622166 TBX1O43435 398 aa9.12□□□□□ -0.95
IGHV3-54-201ENST00000622166 ENTPD6O75354 484 aa9.12□□□□□ -0.95
IGHV3-54-201ENST00000622166 CLEC3AO75596 197 aa9.12□□□□□ -0.95
IGHV3-54-201ENST00000622166 GPX5O75715 221 aa9.12□□□□□ -0.95
IGHV3-54-201ENST00000622166 TP53P04637 393 aaPredicted RBP9.12□□□□□ -0.95
IGHV3-54-201ENST00000622166 EIF2S1P05198 315 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms