RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 EIF2DP41214 584 aaKnown RBP8.95□□□□□ -0.98
PDPN-212ENST00000621990 CTSKP43235 329 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 BCAP31P51572 246 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 CDC42P60953 191 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 RPS26P62854 115 aaKnown RBP8.95□□□□□ -0.98
PDPN-212ENST00000621990 CSNK1G2P78368 415 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 ATP1A4Q13733 1029 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 MLF2Q15773 248 aaPredicted RBP8.95□□□□□ -0.98
PDPN-212ENST00000621990 RPS26P11Q5JNZ5 115 aaPredicted RBP8.95□□□□□ -0.98
PDPN-212ENST00000621990 TMEM236Q5W0B7 351 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 FRMPD2BQ6IN97 320 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 TCTN3Q6NUS6 607 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 FAM180BQ6P0A1 224 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 C19orf48Q6RUI8 117 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 ADCK1Q86TW2 530 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 C9orf43Q8TAL5 461 aaPredicted RBP8.95□□□□□ -0.98
PDPN-212ENST00000621990 ZNF675Q8TD23 568 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 RASSF5Q8WWW0 418 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 ZHX1-C8orf76Q96EF9 292 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 CRELD1Q96HD1 420 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 PRAP1Q96NZ9 151 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 SERHL2Q9H4I8 314 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 SFXN1Q9H9B4 322 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 IMPAD1Q9NX62 359 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 ZSCAN32Q9NX65 697 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 REV1Q9UBZ9 1251 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.95□□□□□ -0.98
PDPN-212ENST00000621990 WDR37Q9Y2I8 494 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 CCDC88CQ9P219 2028 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 EFCAB10A6NFE3 127 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 C5orf58C9J3I9 102 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 AIREO43918 545 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 DRD2P14416 443 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 GJA4P35212 333 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 KCNJ5P48544 419 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 CLCNKAP51800 687 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 CRISP1P54107 249 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 OLR1P78380 273 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 IFITM3Q01628 133 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 PRDX1Q06830 199 aaKnown RBP8.95□□□□□ -0.98
PDPN-212ENST00000621990 ST3GAL4Q11206 333 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 GANABQ14697 944 aaKnown RBP8.95□□□□□ -0.98
PDPN-212ENST00000621990 TMEM35AQ53FP2 167 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 EGFLAMQ63HQ2 1017 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 TNFAIP8L2Q6P589 184 aaPredicted RBP8.95□□□□□ -0.98
PDPN-212ENST00000621990 ZNF367Q7RTV3 350 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 UBE2Q1Q7Z7E8 422 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 TP53I13Q8NBR0 393 aaPredicted RBP8.95□□□□□ -0.98
PDPN-212ENST00000621990 B3GNT7Q8NFL0 401 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 GTPBP3Q969Y2 492 aaKnown RBP8.95□□□□□ -0.98
PDPN-212ENST00000621990 ZNF354BQ96LW1 612 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 TEFMQ96QE5 360 aaKnown RBP8.95□□□□□ -0.98
PDPN-212ENST00000621990 TIMM29Q9BSF4 260 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 AICDAQ9GZX7 198 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 DCSTAMPQ9H295 470 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 MMP27Q9H306 513 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 WDR26Q9H7D7 661 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 MBNL1Q9NR56 388 aaKnown RBP8.95□□□□□ -0.98
PDPN-212ENST00000621990 TEX10Q9NXF1 929 aaPredicted RBP8.95□□□□□ -0.98
PDPN-212ENST00000621990 MS4A12Q9NXJ0 267 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 LMCD1Q9NZU5 365 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 SLC6A14Q9UN76 642 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 NUMA1Q14980 2115 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 TRBV4-1A0A0J9YWV2 114 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 LRIT2A6NDA9 550 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 SLITRK5O94991 958 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 KAT7O95251 611 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 PTHP01270 115 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 STSP08842 583 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 MYOGP15173 224 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 GADD45AP24522 165 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 ELAVL4P26378 380 aaKnown RBP8.94□□□□□ -0.98
PDPN-212ENST00000621990 TGFBR1P36897 503 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 CD97P48960 835 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 ALDH9A1P49189 494 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 RAB28P51157 221 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 PSMD7P51665 324 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 ARFIP1P53367 373 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 NUDT6P53370 316 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 SNRPGP62308 76 aaKnown RBP8.94□□□□□ -0.98
PDPN-212ENST00000621990 ILKQ13418 452 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 CST6Q15828 149 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 ZIC1Q15915 447 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 INAQ16352 499 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 DUSP6Q16828 381 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 SYT16Q17RD7 645 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 TMEM201Q5SNT2 666 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 OR4C11Q6IEV9 310 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 VITQ6UXI7 678 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 USP43Q70EL4 1123 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 PLD3Q8IV08 490 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 TTLQ8NG68 377 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 OR2A1Q8NGT9 310 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 UTP15Q8TED0 518 aaKnown RBP8.94□□□□□ -0.98
PDPN-212ENST00000621990 DSN1Q9H410 356 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 SLC25A19Q9HC21 320 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 ZBTB20Q9HC78 741 aaPredicted RBP8.94□□□□□ -0.98
PDPN-212ENST00000621990 AMBNQ9NP70 447 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 RHCGQ9UBD6 479 aa8.94□□□□□ -0.98
PDPN-212ENST00000621990 PRKAG2Q9UGJ0 569 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms