RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 SOCS6O14544 535 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 MYO1DO94832 1006 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 TGDSO95455 350 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 EFNA1P20827 205 aaPredicted RBP12.79□□□□□ -0.36
NEK3-210ENST00000620675 BUD31P41223 144 aaPredicted RBP12.79□□□□□ -0.36
NEK3-210ENST00000620675 NSDHLQ15738 373 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 ZNF385BQ569K4 471 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 OGFOD2Q6N063 350 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 KIRREL2Q6UWL6 708 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 TMEM132CQ8N3T6 1108 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 CATSPER2Q96P56 530 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 TRIM55Q9BYV6 548 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 NXT1Q9UKK6 140 aaKnown RBP12.79□□□□□ -0.36
NEK3-210ENST00000620675 TNRC6AQ8NDV7 1962 aaKnown RBP12.79□□□□□ -0.36
NEK3-210ENST00000620675 SMG1Q96Q15 3661 aaKnown RBP12.79□□□□□ -0.36
NEK3-210ENST00000620675 ANKRD28O15084 1053 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 TRA2BP62995 288 aaKnown RBP12.79□□□□□ -0.36
NEK3-210ENST00000620675 EEF1A2Q05639 463 aaKnown RBP12.79□□□□□ -0.36
NEK3-210ENST00000620675 MPEG1Q2M385 716 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 QSOX2Q6ZRP7 698 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 MED25Q71SY5 747 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 TICAM1Q8IUC6 712 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 ZNF595Q8IYB9 648 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 KDF1Q8NAX2 398 aaPredicted RBP12.79□□□□□ -0.36
NEK3-210ENST00000620675 PLPP5Q8NEB5 264 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 CEP70Q8NHQ1 597 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 EXOSC8Q96B26 276 aaKnown RBP12.79□□□□□ -0.36
NEK3-210ENST00000620675 PPWD1Q96BP3 646 aaKnown RBP12.79□□□□□ -0.36
NEK3-210ENST00000620675 CNRIP1Q96F85 164 aaPredicted RBP12.79□□□□□ -0.36
NEK3-210ENST00000620675 PFDN4Q9NQP4 134 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 AIG1Q9NVV5 245 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 MS4A12Q9NXJ0 267 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 NOP53Q9NZM5 478 aaKnown RBP12.79□□□□□ -0.36
NEK3-210ENST00000620675 PADI2Q9Y2J8 665 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 GPR45Q9Y5Y3 372 aa12.79□□□□□ -0.36
NEK3-210ENST00000620675 TLN1Q9Y490 2541 aaKnown RBP12.79□□□□□ -0.36
NEK3-210ENST00000620675 GMNCA6NCL1 334 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 CTNSO60931 367 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 VPS4BO75351 444 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 ERAL1O75616 437 aaKnown RBP12.78□□□□□ -0.36
NEK3-210ENST00000620675 IL10P22301 178 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 JAK1P23458 1154 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 MMP11P24347 488 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 IL12AP29459 219 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 FEN1P39748 380 aaKnown RBP12.78□□□□□ -0.36
NEK3-210ENST00000620675 HSD17B7P56937 341 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 UFM1P61960 85 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 ATP1A4Q13733 1029 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 UGT8Q16880 541 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 SLC48A1Q6P1K1 146 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 TMEM205Q6UW68 189 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 ANKRD37Q7Z713 158 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 OR7A2PQ8NGA2 310 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 OR9I1Q8NGQ6 314 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 C10orf82Q8WW14 230 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 ELAC2Q9BQ52 826 aaKnown RBP12.78□□□□□ -0.36
NEK3-210ENST00000620675 WDR77Q9BQA1 342 aaPredicted RBP12.78□□□□□ -0.36
NEK3-210ENST00000620675 ALOXE3Q9BYJ1 711 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 SLAMF7Q9NQ25 335 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 PRDM9Q9NQV7 894 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 ZMIZ1Q9ULJ6 1067 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 SPACA6W5XKT8 324 aa12.78□□□□□ -0.36
NEK3-210ENST00000620675 TCRBV16S1A1N1A0A5B0 115 aa12.77□□□□□ -0.36
NEK3-210ENST00000620675 C1orf226A1L170 272 aa12.77□□□□□ -0.36
NEK3-210ENST00000620675 CDC14CA4D256 554 aa12.77□□□□□ -0.36
NEK3-210ENST00000620675 GABRR3A8MPY1 467 aa12.77□□□□□ -0.36
NEK3-210ENST00000620675 RRP8O43159 456 aaKnown RBP12.77□□□□□ -0.36
NEK3-210ENST00000620675 CELA2AP08217 269 aa12.77□□□□□ -0.36
NEK3-210ENST00000620675 DDCP20711 480 aa12.77□□□□□ -0.36
NEK3-210ENST00000620675 TLX1P31314 330 aaPredicted RBP12.77□□□□□ -0.36
NEK3-210ENST00000620675 SSPNQ14714 243 aa12.77□□□□□ -0.36
NEK3-210ENST00000620675 OR52E8Q6IFG1 317 aa12.77□□□□□ -0.36
NEK3-210ENST00000620675 ACAD11Q709F0 780 aa12.77□□□□□ -0.36
NEK3-210ENST00000620675 MRGPREQ86SM8 312 aa12.77□□□□□ -0.36
NEK3-210ENST00000620675 RIMKLAQ8IXN7 391 aa12.77□□□□□ -0.36
NEK3-210ENST00000620675 OR11G2Q8NGC1 345 aa12.77□□□□□ -0.36
NEK3-210ENST00000620675 CIDECQ96AQ7 238 aaPredicted RBP12.77□□□□□ -0.36
NEK3-210ENST00000620675 KLHL29Q96CT2 875 aa12.77□□□□□ -0.36
NEK3-210ENST00000620675 ASIC5Q9NY37 505 aa12.77□□□□□ -0.36
NEK3-210ENST00000620675 UTS2RQ9UKP6 389 aa12.77□□□□□ -0.36
NEK3-210ENST00000620675 EIF3LQ9Y262 564 aaKnown RBP12.77□□□□□ -0.36
NEK3-210ENST00000620675 MRPS33Q9Y291 106 aaKnown RBP12.77□□□□□ -0.36
NEK3-210ENST00000620675 A0A087WV48 116 aa12.77□□□□□ -0.37
NEK3-210ENST00000620675 HRKO00198 91 aa12.77□□□□□ -0.37
NEK3-210ENST00000620675 CLDN4O14493 209 aa12.77□□□□□ -0.37
NEK3-210ENST00000620675 UBDO15205 165 aa12.77□□□□□ -0.37
NEK3-210ENST00000620675 GPR75O95800 540 aa12.77□□□□□ -0.37
NEK3-210ENST00000620675 TROVE2P10155 538 aaKnown RBP eCLIP12.77□□□□□ -0.37
NEK3-210ENST00000620675 COX6A1P12074 109 aa12.77□□□□□ -0.37
NEK3-210ENST00000620675 SOX18P35713 384 aa12.77□□□□□ -0.37
NEK3-210ENST00000620675 CHAF1BQ13112 559 aa12.77□□□□□ -0.37
NEK3-210ENST00000620675 SFT2D3Q587I9 215 aa12.77□□□□□ -0.37
NEK3-210ENST00000620675 SIMC1Q8NDZ2 872 aa12.77□□□□□ -0.37
NEK3-210ENST00000620675 ADAMTS18Q8TE60 1221 aa12.77□□□□□ -0.37
NEK3-210ENST00000620675 TANKQ92844 425 aa12.77□□□□□ -0.37
NEK3-210ENST00000620675 ZNF681Q96N22 645 aa12.77□□□□□ -0.37
NEK3-210ENST00000620675 PNO1Q9NRX1 252 aaKnown RBP12.77□□□□□ -0.37
NEK3-210ENST00000620675 SEMA3GQ9NS98 782 aa12.77□□□□□ -0.37
NEK3-210ENST00000620675 P4HTMQ9NXG6 502 aa12.77□□□□□ -0.37
NEK3-210ENST00000620675 MMACHCQ9Y4U1 282 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms