RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 ZNF843Q8N446 348 aa10.09□□□□□ -0.79
TARDBP-223ENST00000620632 RBMXL3Q8N7X1 1067 aaKnown RBP10.09□□□□□ -0.79
TARDBP-223ENST00000620632 ZNF321PQ8N8H1 164 aa10.09□□□□□ -0.79
TARDBP-223ENST00000620632 APCDD1LQ8NCL9 501 aa10.09□□□□□ -0.79
TARDBP-223ENST00000620632 DOK4Q8TEW6 326 aa10.09□□□□□ -0.79
TARDBP-223ENST00000620632 PTPMT1Q8WUK0 201 aaPredicted RBP10.09□□□□□ -0.79
TARDBP-223ENST00000620632 VPS50Q96JG6 964 aa10.09□□□□□ -0.79
TARDBP-223ENST00000620632 C3orf30Q96M34 536 aa10.09□□□□□ -0.79
TARDBP-223ENST00000620632 LPAR4Q99677 370 aa10.09□□□□□ -0.79
TARDBP-223ENST00000620632 ALOXE3Q9BYJ1 711 aa10.09□□□□□ -0.79
TARDBP-223ENST00000620632 PNO1Q9NRX1 252 aaKnown RBP10.09□□□□□ -0.79
TARDBP-223ENST00000620632 MS4A12Q9NXJ0 267 aa10.09□□□□□ -0.79
TARDBP-223ENST00000620632 PTGFRNQ9P2B2 879 aa10.09□□□□□ -0.79
TARDBP-223ENST00000620632 HEY2Q9UBP5 337 aa10.09□□□□□ -0.79
TARDBP-223ENST00000620632 VTI1BQ9UEU0 232 aa10.09□□□□□ -0.79
TARDBP-223ENST00000620632 GIMAP2Q9UG22 337 aa10.09□□□□□ -0.79
TARDBP-223ENST00000620632 MCM8Q9UJA3 840 aa10.09□□□□□ -0.79
TARDBP-223ENST00000620632 CES1P1Q9UKY3 287 aa10.09□□□□□ -0.79
TARDBP-223ENST00000620632 POLR3HQ9Y535 204 aaPredicted RBP10.09□□□□□ -0.79
TARDBP-223ENST00000620632 SPACA6W5XKT8 324 aa10.09□□□□□ -0.79
TARDBP-223ENST00000620632 BLACEA4D250 179 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 TMEM114B3SHH9 223 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 NPIPB8E9PQR5 432 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 HRKO00198 91 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 LSM1O15116 133 aaKnown RBP10.08□□□□□ -0.8
TARDBP-223ENST00000620632 PRKNO60260 465 aaPredicted RBP10.08□□□□□ -0.8
TARDBP-223ENST00000620632 SKAP2O75563 359 aaPredicted RBP10.08□□□□□ -0.8
TARDBP-223ENST00000620632 HSPA4LO95757 839 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 IL3P08700 152 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 PRPH2P23942 346 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 SOX11P35716 441 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 SLC1A6P48664 564 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 DUSP2Q05923 314 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 ACSM2AQ08AH3 577 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 IMPG1Q17R60 797 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 PRSS53Q2L4Q9 553 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 SPIN4Q56A73 249 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 XKR7Q5GH72 579 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 SPDYAQ5MJ70 313 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 VWA5B1Q5TIE3 1220 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 HHATQ5VTY9 493 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 ACSM2BQ68CK6 577 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 GALNT18Q6P9A2 607 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 PPP1R14CQ8TAE6 165 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 M1APQ8TC57 530 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 ELP5Q8TE02 316 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 C16orf78Q8WTQ4 265 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 TANKQ92844 425 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 PPWD1Q96BP3 646 aaKnown RBP10.08□□□□□ -0.8
TARDBP-223ENST00000620632 FCRL1Q96LA6 429 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 EML4Q9HC35 981 aaKnown RBP10.08□□□□□ -0.8
TARDBP-223ENST00000620632 MMP25Q9NPA2 562 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 ADAP2Q9NPF8 381 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 NMRK1Q9NWW6 199 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 SIRT5Q9NXA8 310 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 HAO1Q9UJM8 370 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 EXO1Q9UQ84 846 aaKnown RBP10.08□□□□□ -0.8
TARDBP-223ENST00000620632 DLGAP4Q9Y2H0 992 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 PCDHA9Q9Y5H5 950 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 CFAP46Q8IYW2 2715 aa10.08□□□□□ -0.8
TARDBP-223ENST00000620632 EXPH5Q8NEV8 1989 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 ATP6AP2A0A1C7CYW4 349 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 SLC28A1O00337 649 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 SNNO75324 88 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-223ENST00000620632 ATP6AP2O75787 350 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 GPR75O95800 540 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 DDAH2O95865 285 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 IFNA16P05015 189 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 SFTPCP11686 197 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 TACR1P25103 407 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 TLX1P31314 330 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-223ENST00000620632 PTGER1P34995 402 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 SOX18P35713 384 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 STT3AP46977 705 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 TAS2R50P59544 299 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 TRA2BP62995 288 aaKnown RBP10.07□□□□□ -0.8
TARDBP-223ENST00000620632 STX4Q12846 297 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 STX3Q13277 289 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 SERTAD2Q14140 314 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 NR6A1Q15406 480 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 ELAVL1Q15717 326 aaKnown RBP10.07□□□□□ -0.8
TARDBP-223ENST00000620632 EXT1Q16394 746 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 NADK2Q4G0N4 442 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 RFTN2Q52LD8 501 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-223ENST00000620632 AGAP7PQ5VUJ5 663 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 OR52E8Q6IFG1 317 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 NOXRED1Q6NXP6 359 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 H3F3CQ6NXT2 135 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 SLC48A1Q6P1K1 146 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 IGFL2Q6UWQ7 119 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 LINC00696Q6ZRV3 163 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 DDIASQ8IXT1 998 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 B3GNT7Q8NFL0 401 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.07□□□□□ -0.82e-21■■□□□ 12.4
TARDBP-223ENST00000620632 SREK1Q8WXA9 508 aaKnown RBP10.07□□□□□ -0.8
TARDBP-223ENST00000620632 NCLNQ969V3 563 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 EGLN2Q96KS0 407 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 AGAP4Q96P64 663 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 KCNK13Q9HB14 408 aa10.07□□□□□ -0.8
TARDBP-223ENST00000620632 LRTM1Q9HBL6 345 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms