RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	SLC22A1	O15245	554 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ZW10	O43264	779 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SOX14	O95416	240 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PAK4	O96013	591 aa	Predicted RBP	13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	KEL	P23276	732 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PRKAG1	P54619	331 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TRIM16L	Q309B1	348 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	KLHDC8A	Q8IYD2	350 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CLIP4	Q8N3C7	705 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TMIE	Q8NEW7	156 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ZNF347	Q96SE7	839 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	HMG20A	Q9NP66	347 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CCNB1IP1	Q9NPC3	277 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	F5	P12259	2224 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	HOXC11	O43248	304 aa	Predicted RBP	13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	KRT75	O95678	551 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TBX6	O95947	436 aa	Predicted RBP	13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	GAST	P01350	101 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	IGFBP1	P08833	259 aa	Predicted RBP	13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	DBT	P11182	482 aa	Known RBP	13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ACP5	P13686	325 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	DNASE1L3	Q13609	305 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ZNF846	Q147U1	533 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TMEM240	Q5SV17	173 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	DEF8	Q6ZN54	512 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	LSR	Q86X29	649 aa	Predicted RBP	13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	RBM45	Q8IUH3	476 aa	Known RBP	13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	GOT1L1	Q8NHS2	421 aa	Predicted RBP	13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	HCAR2	Q8TDS4	363 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CXorf40B	Q96DE9	158 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	IL4I1	Q96RQ9	567 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	YIPF4	Q9BSR8	244 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	DPEP2	Q9H4A9	486 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	C11orf16	Q9NQ32	467 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	MBNL1	Q9NR56	388 aa	Known RBP	13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ACER3	Q9NUN7	267 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	IMP3	Q9NV31	184 aa	Known RBP	13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	MS4A12	Q9NXJ0	267 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ANGPT4	Q9Y264	503 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CFL2	Q9Y281	166 aa		13.21	□□□□□ -0.29
CACNA1C-231	ENST00000616390	OR2A25	A4D2G3	310 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	MID1	O15344	667 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	RNGTT	O60942	597 aa	Known RBP	13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	NFATC1	O95644	943 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	RB1	P06400	928 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	EVI2B	P34910	448 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ST3GAL4	Q11206	333 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PDE7A	Q13946	482 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PTGES3	Q15185	160 aa	Known RBP	13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	TIGD6	Q17RP2	521 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	KHDRBS2	Q5VWX1	349 aa	Known RBP	13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CORO6	Q6QEF8	472 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PDZD3	Q86UT5	571 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	FBXO15	Q8NCQ5	510 aa	Predicted RBP	13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	GEMIN6	Q8WXD5	167 aa	Known RBP	13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	HERVK_113	Q902F9	699 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	FGF13	Q92913	245 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	WDR34	Q96EX3	536 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ZNF514	Q96K75	400 aa	Predicted RBP	13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PITX2	Q99697	317 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PIP5K1A	Q99755	562 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ITPA	Q9BY32	194 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	GABARAPL3	Q9BY60	117 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CTPS2	Q9NRF8	586 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	TEX10	Q9NXF1	929 aa	Predicted RBP	13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ZNF226	Q9NYT6	803 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	GPR34	Q9UPC5	381 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	KCNK6	Q9Y257	313 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SLC27A6	Q9Y2P4	619 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PCDHGA2	Q9Y5H1	932 aa		13.21	□□□□□ -0.3
CACNA1C-231	ENST00000616390	AIRE	O43918	545 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	LCMT2	O60294	686 aa	Known RBP	13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CCNB2	O95067	398 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	BMP4	P12644	408 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ZNF12	P17014	697 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ITGA2	P17301	1181 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	GADD45A	P24522	165 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PIK3CB	P42338	1070 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PCDH1	Q08174	1060 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	FADD	Q13158	208 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ZNF630	Q2M218	657 aa	Predicted RBP	13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CEP78	Q5JTW2	689 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PNCK	Q6P2M8	343 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	LRRTM4	Q86VH4	590 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	FAM129C	Q86XR2	697 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	DCUN1D3	Q8IWE4	304 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	OR5D16	Q8NGK9	328 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SLC38A5	Q8WUX1	472 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	UBE2E3	Q969T4	207 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	WFDC6	Q9BQY6	131 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	AHSP	Q9NZD4	102 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PFDN2	Q9UHV9	154 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	POFUT2	Q9Y2G5	429 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PLEKHM1	Q9Y4G2	1056 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	TRBV4-1	A0A0J9YWV2	114 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	C17orf113	A0A1B0GUU1	675 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms