RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 ANKRD9Q96BM1 317 aaPredicted RBP13.36□□□□□ -0.27
CTSA-219ENST00000607841 C19orf60Q96EN9 201 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 RBM18Q96H35 190 aaKnown RBP13.36□□□□□ -0.27
CTSA-219ENST00000607841 THOC3Q96J01 351 aaKnown RBP13.36□□□□□ -0.27
CTSA-219ENST00000607841 WDR77Q9BQA1 342 aaPredicted RBP13.36□□□□□ -0.27
CTSA-219ENST00000607841 PELOQ9BRX2 385 aaKnown RBP13.36□□□□□ -0.27
CTSA-219ENST00000607841 SLC25A23Q9BV35 468 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 EBPLQ9BY08 206 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 LHPPQ9H008 270 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 ADAP2Q9NPF8 381 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 PNO1Q9NRX1 252 aaKnown RBP13.36□□□□□ -0.27
CTSA-219ENST00000607841 GPR83Q9NYM4 423 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 PCDHGA9Q9Y5G4 932 aaKnown RBP13.36□□□□□ -0.27
CTSA-219ENST00000607841 PCDHA9Q9Y5H5 950 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 PTGDR2Q9Y5Y4 395 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 PTPRQQ9UMZ3 2332 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 SCN3AQ9NY46 2000 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 CHD6Q8TD26 2715 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 BAHCC1Q9P281 2608 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 SAGE2PA6NJ88 616 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 GLOD5A6NK44 160 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 LSM1O15116 133 aaKnown RBP13.35□□□□□ -0.27
CTSA-219ENST00000607841 PGRMC2O15173 223 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 ATXN7O15265 892 aaPredicted RBP13.35□□□□□ -0.27
CTSA-219ENST00000607841 FGF17O60258 216 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 PRKRAO75569 313 aaKnown RBP13.35□□□□□ -0.27
CTSA-219ENST00000607841 PIK3R1P27986 724 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 MAPK1P28482 360 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 SLC26A5P58743 744 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 IGLV3-21P80748 117 aaPredicted RBP13.35□□□□□ -0.27
CTSA-219ENST00000607841 PLIN5Q00G26 463 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 MYBPC3Q14896 1274 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 PDCD2Q16342 344 aaPredicted RBP13.35□□□□□ -0.27
CTSA-219ENST00000607841 GALNTL6Q49A17 601 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 XKR7Q5GH72 579 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 SLC48A1Q6P1K1 146 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 CRLF3Q8IUI8 442 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 OR4N5Q8IXE1 308 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 FDCSPQ8NFU4 85 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 OR4K14Q8NGD5 310 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 OR2T11Q8NH01 316 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 DNAJB14Q8TBM8 379 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 C16orf78Q8WTQ4 265 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 TUBGCP3Q96CW5 907 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 ABHD17AQ96GS6 310 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 DGAT2Q96PD7 388 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 MMP25Q9NPA2 562 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 DLGAP4Q9Y2H0 992 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 POLR3HQ9Y535 204 aaPredicted RBP13.35□□□□□ -0.27
CTSA-219ENST00000607841 PCDHGB7Q9Y5F8 929 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 CLDN16Q9Y5I7 305 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 CLCA3PQ9Y6N3 262 aa13.35□□□□□ -0.27
CTSA-219ENST00000607841 ATP6AP2A0A1C7CYW4 349 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 A8MUA0 341 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 DYNC1I1O14576 645 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 OR10H2O60403 315 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 PEX11AO75192 247 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 VPS4BO75351 444 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 ATP6AP2O75787 350 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 IL3P08700 152 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 PRR35P0CG20 571 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 SLC35E2P0CK97 266 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 ALOX15P16050 662 aaPredicted RBP13.34□□□□□ -0.27
CTSA-219ENST00000607841 STT3AP46977 705 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 ALDH9A1P49189 494 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 HK2P52789 917 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 RPL38P63173 70 aaKnown RBP13.34□□□□□ -0.27
CTSA-219ENST00000607841 OCRLQ01968 901 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 ID2Q02363 134 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 MAD2L1Q13257 205 aaPredicted RBP13.34□□□□□ -0.27
CTSA-219ENST00000607841 RFTN2Q52LD8 501 aaPredicted RBP13.34□□□□□ -0.27
CTSA-219ENST00000607841 AGAP7PQ5VUJ5 663 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 TCTN3Q6NUS6 607 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 IKBIPQ70UQ0 350 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 SAMD14Q8IZD0 417 aaPredicted RBP13.34□□□□□ -0.27
CTSA-219ENST00000607841 ST13P4Q8IZP2 240 aaPredicted RBP13.34□□□□□ -0.27
CTSA-219ENST00000607841 OR14A16Q8NHC5 309 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 C9orf43Q8TAL5 461 aaPredicted RBP13.34□□□□□ -0.27
CTSA-219ENST00000607841 AGAP4Q96P64 663 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 PNPOQ9NVS9 261 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 EHD3Q9NZN3 535 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 TEKT2Q9UIF3 430 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 ZNF780BQ9Y6R6 833 aa13.34□□□□□ -0.27
CTSA-219ENST00000607841 TRPC5OSA6NMA1 111 aa13.33□□□□□ -0.28
CTSA-219ENST00000607841 C17orf105B2RV13 164 aa13.33□□□□□ -0.28
CTSA-219ENST00000607841 TGFBR3LH3BV60 316 aa13.33□□□□□ -0.28
CTSA-219ENST00000607841 MASP2O00187 686 aa13.33□□□□□ -0.28
CTSA-219ENST00000607841 HDAC3O15379 428 aa13.33□□□□□ -0.28
CTSA-219ENST00000607841 CSNK2A2P19784 350 aaPredicted RBP13.33□□□□□ -0.28
CTSA-219ENST00000607841 DDCP20711 480 aa13.33□□□□□ -0.28
CTSA-219ENST00000607841 GALNSP34059 522 aa13.33□□□□□ -0.28
CTSA-219ENST00000607841 XKP51811 444 aa13.33□□□□□ -0.28
CTSA-219ENST00000607841 PGDP52209 483 aa13.33□□□□□ -0.28
CTSA-219ENST00000607841 C2orf80Q0P641 193 aa13.33□□□□□ -0.28
CTSA-219ENST00000607841 Q0VFX4 171 aa13.33□□□□□ -0.28
CTSA-219ENST00000607841 SMU1Q2TAY7 513 aa13.33□□□□□ -0.28
CTSA-219ENST00000607841 CRB2Q5IJ48 1285 aa13.33□□□□□ -0.28
CTSA-219ENST00000607841 C6orf136Q5SQH8 315 aa13.33□□□□□ -0.28
CTSA-219ENST00000607841 VWA5B1Q5TIE3 1220 aa13.33□□□□□ -0.28
CTSA-219ENST00000607841 HPS6Q86YV9 775 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms