RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 DYDC1Q8WWB3 177 aa13□□□□□ -0.33
RNF40-212ENST00000602784 C19orf60Q96EN9 201 aa13□□□□□ -0.33
RNF40-212ENST00000602784 ALOXE3Q9BYJ1 711 aa13□□□□□ -0.33
RNF40-212ENST00000602784 ADAP2Q9NPF8 381 aa13□□□□□ -0.33
RNF40-212ENST00000602784 CES1P1Q9UKY3 287 aa13□□□□□ -0.33
RNF40-212ENST00000602784 PSME2Q9UL46 239 aa13□□□□□ -0.33
RNF40-212ENST00000602784 G3BP2Q9UN86 482 aaKnown RBP13□□□□□ -0.33
RNF40-212ENST00000602784 PPIEQ9UNP9 301 aaKnown RBP13□□□□□ -0.33
RNF40-212ENST00000602784 DLGAP4Q9Y2H0 992 aa13□□□□□ -0.33
RNF40-212ENST00000602784 ATMQ13315 3056 aa13□□□□□ -0.33
RNF40-212ENST00000602784 IGHV3-20A0A0C4DH32 117 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 GLOD5A6NK44 160 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 PGRMC2O15173 223 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 FGF17O60258 216 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 LDB3O75112 727 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 SEC24DO94855 1032 aaPredicted RBP12.99□□□□□ -0.33
RNF40-212ENST00000602784 PRR35P0CG20 571 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 GALNSP34059 522 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 HK2P52789 917 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 TAS2R50P59544 299 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 FOLH1Q04609 750 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 ZNF763Q0D2J5 394 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 Q0VFX4 171 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 CHAF1BQ13112 559 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 KCNAB2Q13303 367 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 MYBPC3Q14896 1274 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 HEPACAMQ14CZ8 416 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 ATP6AP1LQ52LC2 224 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 RFTN2Q52LD8 501 aaPredicted RBP12.99□□□□□ -0.33
RNF40-212ENST00000602784 SLC48A1Q6P1K1 146 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 IKBIPQ70UQ0 350 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 CLNKQ7Z7G1 428 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 PARP9Q8IXQ6 854 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 LRRC34Q8IZ02 419 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 TMEM132CQ8N3T6 1108 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 ARFGAP2Q8N6H7 521 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 OR4K14Q8NGD5 310 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 LRRC8CQ8TDW0 803 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 CKAP2Q8WWK9 683 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 RBM18Q96H35 190 aaKnown RBP12.99□□□□□ -0.33
RNF40-212ENST00000602784 C3orf30Q96M34 536 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 C7orf26Q96N11 449 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 PELOQ9BRX2 385 aaKnown RBP12.99□□□□□ -0.33
RNF40-212ENST00000602784 LHPPQ9H008 270 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 MYNNQ9NPC7 610 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 PNPOQ9NVS9 261 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 EHD3Q9NZN3 535 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 PCDHGB7Q9Y5F8 929 aa12.99□□□□□ -0.33
RNF40-212ENST00000602784 FAM208BQ5VWN6 2430 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 SAGE2PA6NJ88 616 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 ATXN7O15265 892 aaPredicted RBP12.98□□□□□ -0.33
RNF40-212ENST00000602784 HDAC3O15379 428 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 VPS4BO75351 444 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 SKAP2O75563 359 aaPredicted RBP12.98□□□□□ -0.33
RNF40-212ENST00000602784 PRKRAO75569 313 aaKnown RBP12.98□□□□□ -0.33
RNF40-212ENST00000602784 DNAJB5O75953 348 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 FAM87AP0C7U9 286 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 SLC35E2P0CK97 266 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 ITGA3P26006 1051 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 PIK3R1P27986 724 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 MAPK1P28482 360 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 STT3AP46977 705 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 SLC26A5P58743 744 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 PDCD2Q16342 344 aaPredicted RBP12.98□□□□□ -0.33
RNF40-212ENST00000602784 C6orf136Q5SQH8 315 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 IRAK1BP1Q5VVH5 260 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 FAM71E1Q6IPT2 247 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 TCTN3Q6NUS6 607 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 PCSK4Q6UW60 755 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 RGS9BPQ6ZS82 235 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 SAMD14Q8IZD0 417 aaPredicted RBP12.98□□□□□ -0.33
RNF40-212ENST00000602784 ST13P4Q8IZP2 240 aaPredicted RBP12.98□□□□□ -0.33
RNF40-212ENST00000602784 EXD3Q8N9H8 876 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 NFAM1Q8NET5 270 aaPredicted RBP12.98□□□□□ -0.33
RNF40-212ENST00000602784 B3GNT7Q8NFL0 401 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 DAZLQ92904 295 aaKnown RBP12.98□□□□□ -0.33
RNF40-212ENST00000602784 MAGEB18Q96M61 343 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 SLC25A23Q9BV35 468 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 MEAF6Q9HAF1 191 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 MMP25Q9NPA2 562 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 PNO1Q9NRX1 252 aaKnown RBP12.98□□□□□ -0.33
RNF40-212ENST00000602784 TAS2R7Q9NYW3 318 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 CLCA3PQ9Y6N3 262 aa12.98□□□□□ -0.33
RNF40-212ENST00000602784 TLN1Q9Y490 2541 aaKnown RBP12.98□□□□□ -0.33
RNF40-212ENST00000602784 ATP6AP2A0A1C7CYW4 349 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 TRPC5OSA6NMA1 111 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 WASHC1A8K0Z3 465 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 MASP2O00187 686 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 PEX11AO75192 247 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 ATP6AP2O75787 350 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 IFNA16P05015 189 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 ALPPP05187 535 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 JUNP05412 331 aaKnown RBP12.97□□□□□ -0.33
RNF40-212ENST00000602784 IL3P08700 152 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 BCKDHAP12694 445 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 COX7A2P14406 83 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 ALOX15P16050 662 aaPredicted RBP12.97□□□□□ -0.33
RNF40-212ENST00000602784 ASMTP46597 345 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 GPR143P51810 404 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 RPL38P63173 70 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms