RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 MS4A8Q9BY19 250 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 CNOT10Q9H9A5 744 aaKnown RBP16.12■□□□□ 0.17
RETREG3-212ENST00000593251 IGSF5Q9NSI5 407 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 TRMT1Q9NXH9 659 aaKnown RBP16.12■□□□□ 0.17
RETREG3-212ENST00000593251 KIAA1549Q9HCM3 1950 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 CCNT2O60583 730 aaKnown RBP16.11■□□□□ 0.17
RETREG3-212ENST00000593251 LRATO95237 230 aa16.11■□□□□ 0.17
RETREG3-212ENST00000593251 CPN2P22792 545 aa16.11■□□□□ 0.17
RETREG3-212ENST00000593251 GMPRP36959 345 aa16.11■□□□□ 0.17
RETREG3-212ENST00000593251 DR1Q01658 176 aa16.11■□□□□ 0.17
RETREG3-212ENST00000593251 IRF8Q02556 426 aa16.11■□□□□ 0.17
RETREG3-212ENST00000593251 CHIT1Q13231 466 aa16.11■□□□□ 0.17
RETREG3-212ENST00000593251 CEBPEQ15744 281 aa16.11■□□□□ 0.17
RETREG3-212ENST00000593251 ZNF791Q3KP31 576 aaPredicted RBP16.11■□□□□ 0.17
RETREG3-212ENST00000593251 SLC25A35Q3KQZ1 300 aa16.11■□□□□ 0.17
RETREG3-212ENST00000593251 SLC22A10Q63ZE4 541 aa16.11■□□□□ 0.17
RETREG3-212ENST00000593251 SULT1C3Q6IMI6 304 aa16.11■□□□□ 0.17
RETREG3-212ENST00000593251 TGIF2LYQ8IUE0 185 aa16.11■□□□□ 0.17
RETREG3-212ENST00000593251 ZNF473Q8WTR7 871 aaKnown RBP16.11■□□□□ 0.17
RETREG3-212ENST00000593251 SENP5Q96HI0 755 aaPredicted RBP16.11■□□□□ 0.17
RETREG3-212ENST00000593251 FOXC2Q99958 501 aa16.11■□□□□ 0.17
RETREG3-212ENST00000593251 TBCDQ9BTW9 1192 aa16.11■□□□□ 0.17
RETREG3-212ENST00000593251 ROGDIQ9GZN7 287 aa16.11■□□□□ 0.17
RETREG3-212ENST00000593251 CXXC4Q9H2H0 198 aa16.11■□□□□ 0.17
RETREG3-212ENST00000593251 SLC6A15Q9H2J7 730 aa16.11■□□□□ 0.17
RETREG3-212ENST00000593251 CD274Q9NZQ7 290 aa16.11■□□□□ 0.17
RETREG3-212ENST00000593251 ST6GALNAC2Q9UJ37 374 aa16.11■□□□□ 0.17
RETREG3-212ENST00000593251 MPDZO75970 2070 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 EXPH5Q8NEV8 1989 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 TP73O15350 636 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 HCN1O60741 890 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 SEC31AO94979 1220 aaKnown RBP16.1■□□□□ 0.17
RETREG3-212ENST00000593251 TGFB1P01137 390 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 PCNAP12004 261 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 CD1DP15813 335 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 KLK2P20151 261 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 HIST1H1TP22492 207 aaPredicted RBP16.1■□□□□ 0.17
RETREG3-212ENST00000593251 UQCRC1P31930 480 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 KIR2DL3P43628 341 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 TRPC1P48995 793 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 KCNJ2P63252 427 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 POU4F1Q01851 419 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 LAPTM5Q13571 262 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 HIST2H2ACQ16777 129 aaPredicted RBP16.1■□□□□ 0.17
RETREG3-212ENST00000593251 MPEG1Q2M385 716 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 AP5B1Q2VPB7 878 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 HIST2H2AA3Q6FI13 130 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 LYPD8Q6UX82 237 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 RNF175Q8N4F7 328 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 DGAT2Q96PD7 388 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 ZNF703Q9H7S9 590 aaPredicted RBP16.1■□□□□ 0.17
RETREG3-212ENST00000593251 SH2D2AQ9NP31 389 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 NSMCE4AQ9NXX6 385 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 CRIM1Q9NZV1 1036 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 PTBP2Q9UKA9 531 aaKnown RBP16.1■□□□□ 0.17
RETREG3-212ENST00000593251 SPACA6W5XKT8 324 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 ACANP16112 2415 aa16.1■□□□□ 0.17
RETREG3-212ENST00000593251 NAV3Q8IVL0 2385 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 ABCA4P78363 2273 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 LRRC3CA6NJW4 275 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 CXorf49A8MYA2 514 aaPredicted RBP16.09■□□□□ 0.17
RETREG3-212ENST00000593251 KDM4EB2RXH2 506 aaPredicted RBP16.09■□□□□ 0.17
RETREG3-212ENST00000593251 PRKRAO75569 313 aaKnown RBP16.09■□□□□ 0.17
RETREG3-212ENST00000593251 IGKV3-11P04433 115 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 COX7A2P14406 83 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 SSR2P43308 183 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 STT3AP46977 705 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 WNT3P56703 355 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 IGLV3-21P80748 117 aaPredicted RBP16.09■□□□□ 0.17
RETREG3-212ENST00000593251 PAGE2BQ5JRK9 111 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 RIPPLY2Q5TAB7 128 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 SEM1Q6ZVN7 128 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 SYDE1Q6ZW31 735 aaPredicted RBP16.09■□□□□ 0.17
RETREG3-212ENST00000593251 ULK2Q8IYT8 1036 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 ZBED8Q8IZ13 594 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 RELL2Q8NC24 303 aaPredicted RBP16.09■□□□□ 0.17
RETREG3-212ENST00000593251 PDPRQ8NCN5 879 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 FAM13CQ8NE31 585 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 SRFBP1Q8NEF9 429 aaKnown RBP16.09■□□□□ 0.17
RETREG3-212ENST00000593251 NUBPLQ8TB37 319 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 SLC22A8Q8TCC7 542 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 PAQR8Q8TEZ7 354 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 NINJ1Q92982 152 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 SPACA9Q96E40 222 aaPredicted RBP16.09■□□□□ 0.17
RETREG3-212ENST00000593251 JSRP1Q96MG2 331 aaPredicted RBP16.09■□□□□ 0.17
RETREG3-212ENST00000593251 KRT12Q99456 494 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 PHACTR1Q9C0D0 580 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 CLEC4MQ9H2X3 399 aaPredicted RBP16.09■□□□□ 0.17
RETREG3-212ENST00000593251 OR51B5Q9H339 312 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 PROK2Q9HC23 129 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 PLEKHA6Q9Y2H5 1048 aa16.09■□□□□ 0.17
RETREG3-212ENST00000593251 E7ESA3 106 aa16.08■□□□□ 0.16
RETREG3-212ENST00000593251 S100BP04271 92 aaPredicted RBP16.08■□□□□ 0.16
RETREG3-212ENST00000593251 GABRA1P14867 456 aa16.08■□□□□ 0.16
RETREG3-212ENST00000593251 HOXB4P17483 251 aaPredicted RBP16.08■□□□□ 0.16
RETREG3-212ENST00000593251 PPP2R2AP63151 447 aa16.08■□□□□ 0.16
RETREG3-212ENST00000593251 SLAMF1Q13291 335 aa16.08■□□□□ 0.16
RETREG3-212ENST00000593251 NAXEQ8NCW5 288 aa16.08■□□□□ 0.16
RETREG3-212ENST00000593251 BBOF1Q8ND07 529 aa16.08■□□□□ 0.16
RETREG3-212ENST00000593251 CHDHQ8NE62 594 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms