RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 PRDM9Q9NQV7 894 aa12.5□□□□□ -0.41
CHAF1A-202ENST00000585371 P4HTMQ9NXG6 502 aa12.5□□□□□ -0.41
CHAF1A-202ENST00000585371 PCDHA9Q9Y5H5 950 aa12.5□□□□□ -0.41
CHAF1A-202ENST00000585371 A0A1W2PS29 197 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 BLACEA4D250 179 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 GLOD5A6NK44 160 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 TCP11X1B4DZS4 312 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 EDF1O60869 148 aaKnown RBP12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 LDB3O75112 727 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 PEX11AO75192 247 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 C8orf89P0DMQ9 161 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 NR2F6P10588 404 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 COX6A1P12074 109 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 BCKDHAP12694 445 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 ACPPP15309 386 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 MDH1P40925 334 aaKnown RBP12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 TAS2R50P59544 299 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 RPL38P63173 70 aaKnown RBP12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 TBR1Q16650 682 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 PRSS53Q2L4Q9 553 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 SMU1Q2TAY7 513 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 MFSD4BQ5TF39 518 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 FAM71E1Q6IPT2 247 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 RAB43Q86YS6 212 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 CRLF3Q8IUI8 442 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 THAP4Q8WY91 577 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 TUBGCP3Q96CW5 907 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 IMMP1LQ96LU5 166 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 MYNNQ9NPC7 610 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 RIC8BQ9NVN3 520 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 TMED5Q9Y3A6 229 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 USH1CQ9Y6N9 552 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 SPACA6W5XKT8 324 aa12.49□□□□□ -0.41
CHAF1A-202ENST00000585371 CPAMD8Q8IZJ3 1885 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 IGHV1-45A0A0A0MS14 117 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 IGHV3-20A0A0C4DH32 117 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 MYOCOSA0A1B0GUC4 107 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 ARHGAP10A1A4S6 786 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 SLCO1B7G3V0H7 640 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 PYCARD-AS1I3L0S3 204 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 CLDN4O14493 209 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 PCDH17O14917 1159 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 IL3P08700 152 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 FAM87AP0C7U9 286 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 PPP2R1BP30154 601 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 BUD31P41223 144 aaPredicted RBP12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 GSTM5P46439 218 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 ID2Q02363 134 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 EMX2Q04743 252 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 ZNF763Q0D2J5 394 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 Q0VFX4 171 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 NSDHLQ15738 373 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 SLC9B1Q4ZJI4 515 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 ATP6AP1LQ52LC2 224 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 OGFOD2Q6N063 350 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 SLC48A1Q6P1K1 146 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 CPEB2Q7Z5Q1 589 aaKnown RBP12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 OR4N5Q8IXE1 308 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 LRRC34Q8IZ02 419 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 NFAM1Q8NET5 270 aaPredicted RBP12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 TANKQ92844 425 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 IP6K3Q96PC2 410 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 ZNF700Q9H0M5 742 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 ADNPQ9H2P0 1102 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 WDR55Q9H6Y2 383 aaPredicted RBP12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 ASIC5Q9NY37 505 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 C5AR2Q9P296 337 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 VTI1BQ9UEU0 232 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 BAIAP2L1Q9UHR4 511 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 POLHQ9Y253 713 aa12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 MRPS33Q9Y291 106 aaKnown RBP12.48□□□□□ -0.41
CHAF1A-202ENST00000585371 GNG14A0A1W2PPG7 69 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 C1orf226A1L170 272 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 SUV39H1O43463 412 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 GPR75O95800 540 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 EPHA3P29320 983 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 SOX18P35713 384 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 FOLH1Q04609 750 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 EEF1A2Q05639 463 aaKnown RBP12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 DUSP2Q05923 314 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 SLC13A2Q13183 592 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 DEFB109BQ30KR1 87 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 SFT2D3Q587I9 215 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 IL23RQ5VWK5 629 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 CPZQ66K79 652 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 OR52E8Q6IFG1 317 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 CGB2Q6NT52 195 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 EPGNQ6UW88 154 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 ZNF681Q96N22 645 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 ZNF317Q96PQ6 595 aaPredicted RBP12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 OR52B2Q96RD2 323 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 C1orf50Q9BV19 199 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 ALOXE3Q9BYJ1 711 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 TRIM55Q9BYV6 548 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 SLC25A18Q9H1K4 315 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 PFDN4Q9NQP4 134 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 FBXL4Q9UKA2 621 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 KCNMB2Q9Y691 235 aa12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 TNRC6AQ8NDV7 1962 aaKnown RBP12.47□□□□□ -0.41
CHAF1A-202ENST00000585371 GOLGA8QA0A0J9YX86 632 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms