RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	MTF1	Q14872	753 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	RBBP5	Q15291	538 aa	Known RBP	2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	E2F5	Q15329	346 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	TEAD2	Q15562	447 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	TYSND1	Q2T9J0	566 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	SLC25A52	Q3SY17	297 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	KLHL26	Q53HC5	615 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	BRMS1L	Q5PSV4	323 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	ARMC4	Q5T2S8	1044 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	GFI1B	Q5VTD9	330 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	SDHAF4	Q5VUM1	108 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	C18orf63	Q68DL7	685 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	GTF2H2C	Q6P1K8	395 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	ALKBH5	Q6P6C2	394 aa	Known RBP	2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	C11orf88	Q6PI97	169 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	FAM198B	Q6UWH4	519 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	ZNF704	Q6ZNC4	412 aa	Predicted RBP	2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	FAM183BP	Q6ZVS7	135 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	ASB18	Q6ZVZ8	466 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	ZNF534	Q76KX8	674 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	GET4	Q7L5D6	327 aa	Predicted RBP	2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	STRADA	Q7RTN6	431 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	CENPV	Q7Z7K6	275 aa	Predicted RBP	2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	DSG4	Q86SJ6	1040 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	SLC9B2	Q86UD5	537 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	GPR180	Q86V85	440 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	IQCH	Q86VS3	1027 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	SNX32	Q86XE0	403 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	TMEM139	Q8IV31	216 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	UNC45B	Q8IWX7	931 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	NIPA2	Q8N8Q9	360 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	OR13A1	Q8NGR1	328 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	OR5R1	Q8NH85	324 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	ITFG1	Q8TB96	612 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	UBA3	Q8TBC4	463 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	DQX1	Q8TE96	717 aa	Known RBP	2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	RNF139	Q8WU17	664 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	ANP32B	Q92688	251 aa	Known RBP	2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	MR1	Q95460	341 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	EXOC4	Q96A65	974 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	TCEAL4	Q96EI5	215 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	SIPA1	Q96FS4	1042 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	CCDC42	Q96M95	316 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	NPY6R	Q99463	290 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	OLFM1	Q99784	485 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	DDX50	Q9BQ39	737 aa	Known RBP	2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	CNPY3	Q9BT09	278 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	LRRC1	Q9BTT6	524 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	NUP85	Q9BW27	656 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	SLC2A11	Q9BYW1	496 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	C8orf33	Q9H7E9	229 aa	Predicted RBP	2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	NOL11	Q9H8H0	719 aa	Known RBP	2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	CNOT10	Q9H9A5	744 aa	Known RBP	2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	NMUR1	Q9HB89	426 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	ZFP14	Q9HCL3	533 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	ACP6	Q9NPH0	428 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	OSER1	Q9NX31	292 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	TAS2R14	Q9NYV8	317 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	ADAM22	Q9P0K1	906 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	UVRAG	Q9P2Y5	699 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	LSM7	Q9UK45	103 aa	Known RBP	2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	FBXL2	Q9UKC9	423 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	DUSP12	Q9UNI6	340 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	DLGAP4	Q9Y2H0	992 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	OR2W1	Q9Y3N9	320 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	PCDHGA5	Q9Y5G8	931 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	SZT2	Q5T011	3432 aa		2.95	□□□□□ -1.94
MSI2-215	ENST00000582453	PDCD11	Q14690	1871 aa	Known RBP	2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	TTC28	Q96AY4	2481 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	KIAA1671	Q9BY89	1806 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453		A0A087WV48	116 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	TMEM221	A6NGB7	291 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	HEPACAM2	A8MVW5	462 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	CAPN9	O14815	690 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	ZNF263	O14978	683 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	NDUFS4	O43181	175 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	ZNHIT1	O43257	154 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	GRID2	O43424	1007 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	OR10H2	O60403	315 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	SYNCRIP	O60506	623 aa	Known RBP	2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	PROSC	O94903	275 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	PRAMEF12	O95522	483 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	PENK	P01210	267 aa	Predicted RBP	2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	SP1	P08047	785 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	H2AFZ	P0C0S5	128 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	LINGO3	P0C6S8	592 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	MBL2	P11226	248 aa	Predicted RBP	2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	VPREB1	P12018	145 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	KRT3	P12035	628 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	ERCC2	P18074	760 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	ACHE	P22303	614 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	ATP5D	P30049	168 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	HOXC13	P31276	330 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	SDC4	P31431	198 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	CCR1	P32246	355 aa		2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	RDX	P35241	583 aa	Known RBP	2.94	□□□□□ -1.94
MSI2-215	ENST00000582453	PCK1	P35558	622 aa		2.94	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms