RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 PIM1P11309 404 aaPredicted RBP7.41□□□□□ -1.22
CCDC40-215ENST00000576033 RNH1P13489 461 aaKnown RBP7.41□□□□□ -1.22
CCDC40-215ENST00000576033 ACPPP15309 386 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 NQO1P15559 274 aaKnown RBP7.41□□□□□ -1.22
CCDC40-215ENST00000576033 CALB2P22676 271 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 TACR1P25103 407 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 GSTM2P28161 218 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 PRDX6P30041 224 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 ADSLP30566 484 aaPredicted RBP7.41□□□□□ -1.22
CCDC40-215ENST00000576033 KCNJ2P63252 427 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 MC1RQ01726 317 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 KCNAB2Q13303 367 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 SSPNQ14714 243 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 UGT3A2Q3SY77 523 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 SLC9B1Q4ZJI4 515 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 TMEM35AQ53FP2 167 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 SOWAHCQ53LP3 525 aaPredicted RBP7.41□□□□□ -1.22
CCDC40-215ENST00000576033 SFT2D3Q587I9 215 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 DCAF10Q5QP82 559 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 VWA5B1Q5TIE3 1220 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 MRM1Q6IN84 353 aaKnown RBP7.41□□□□□ -1.22
CCDC40-215ENST00000576033 ANKRD26P1Q6NSI1 321 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 TMEM205Q6UW68 189 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 C16orf47Q6ZP98 133 aaPredicted RBP7.41□□□□□ -1.22
CCDC40-215ENST00000576033 CHSY3Q70JA7 882 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 NUDT13Q86X67 352 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 PTRH1Q86Y79 214 aaKnown RBP7.41□□□□□ -1.22
CCDC40-215ENST00000576033 RAB43Q86YS6 212 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 SCUBE1Q8IWY4 988 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 METTL4Q8N3J2 472 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 CPSF7Q8N684 471 aaKnown RBP7.41□□□□□ -1.22
CCDC40-215ENST00000576033 SIRT6Q8N6T7 355 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 SIMC1Q8NDZ2 872 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 CLHC1Q8NHS4 586 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 ACTRT2Q8TDY3 377 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 UTP4Q969X6 686 aaKnown RBP7.41□□□□□ -1.22
CCDC40-215ENST00000576033 RGMAQ96B86 450 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 ANKRD9Q96BM1 317 aaPredicted RBP7.41□□□□□ -1.22
CCDC40-215ENST00000576033 PPWD1Q96BP3 646 aaKnown RBP7.41□□□□□ -1.22
CCDC40-215ENST00000576033 KLHL29Q96CT2 875 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 REPS1Q96D71 796 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 NSL1Q96IY1 281 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 PTCHD1Q96NR3 888 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 OR52B2Q96RD2 323 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 NPAS2Q99743 824 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 EFHD1Q9BUP0 239 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 MEAF6Q9HAF1 191 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 EML4Q9HC35 981 aaKnown RBP7.41□□□□□ -1.22
CCDC40-215ENST00000576033 PRTFDC1Q9NRG1 225 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 SEMA3GQ9NS98 782 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 GPR83Q9NYM4 423 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 ZNF223Q9UK11 482 aaPredicted RBP7.41□□□□□ -1.22
CCDC40-215ENST00000576033 NXT1Q9UKK6 140 aaKnown RBP7.41□□□□□ -1.22
CCDC40-215ENST00000576033 SNX6Q9UNH7 406 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 DLGAP4Q9Y2H0 992 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 TSC22D4Q9Y3Q8 395 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 DNAJC15Q9Y5T4 150 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 LOC102723996A0A087X1L8 192 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 TCRBV16S1A1N1A0A5B0 115 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 URADA6NGE7 173 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 TRPC5OSA6NMA1 111 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 PSMD12O00232 456 aaPredicted RBP7.4□□□□□ -1.22
CCDC40-215ENST00000576033 PCDH7O60245 1069 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 PRMT3O60678 531 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 ENO1P06733 434 aaKnown RBP7.4□□□□□ -1.22
CCDC40-215ENST00000576033 IL3P08700 152 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 FAM58BPP0C7Q3 252 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 NR2F6P10588 404 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 UROSP10746 265 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 CPN2P22792 545 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 ITGA3P26006 1051 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 PTX3P26022 381 aaPredicted RBP7.4□□□□□ -1.22
CCDC40-215ENST00000576033 SERPINB1P30740 379 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 RASSF2P50749 326 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 RPL38P63173 70 aaKnown RBP7.4□□□□□ -1.22
CCDC40-215ENST00000576033 PHEXP78562 749 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 FOLH1Q04609 750 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 SRSF11Q05519 484 aaKnown RBP7.4□□□□□ -1.22
CCDC40-215ENST00000576033 CSTF3Q12996 717 aaKnown RBP7.4□□□□□ -1.22
CCDC40-215ENST00000576033 SLC13A2Q13183 592 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 CUL3Q13618 768 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 LTB4RQ15722 352 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 NSDHLQ15738 373 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 AP5B1Q2VPB7 878 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 PAPD4Q6PIY7 484 aaKnown RBP7.4□□□□□ -1.22
CCDC40-215ENST00000576033 CYP20A1Q6UW02 462 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 QSOX2Q6ZRP7 698 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 Q6ZSR9 355 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 DDIASQ8IXT1 998 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 ZCCHC7Q8N3Z6 543 aaKnown RBP7.4□□□□□ -1.22
CCDC40-215ENST00000576033 BRIX1Q8TDN6 353 aaKnown RBP7.4□□□□□ -1.22
CCDC40-215ENST00000576033 CHTF18Q8WVB6 975 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 APOBEC4Q8WW27 367 aaKnown RBP7.4□□□□□ -1.22
CCDC40-215ENST00000576033 GFM2Q969S9 779 aaKnown RBP7.4□□□□□ -1.22
CCDC40-215ENST00000576033 C11orf24Q96F05 449 aaPredicted RBP7.4□□□□□ -1.22
CCDC40-215ENST00000576033 ABHD17AQ96GS6 310 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 OR1F2PQ96R84 312 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 SERPINI1Q99574 410 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 TBCDQ9BTW9 1192 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 C1orf50Q9BV19 199 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms