RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 TRMT5Q32P41 509 aaKnown RBP22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 CNRIP1Q96F85 164 aaPredicted RBP22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 CCDC115Q96NT0 180 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 SLC6A13Q9NSD5 602 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 ERVK-11Q9UQG0 969 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 MAN2B2Q9Y2E5 1009 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 MAP4K5Q9Y4K4 846 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 FAM149AA5PLN7 773 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 FXYD1O00168 92 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 RFXANKO14593 260 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 B4GALT2O60909 372 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 LDB3O75112 727 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 CPNE3O75131 537 aaKnown RBP22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 JRKO75564 520 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 KCNH1O95259 989 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 C6orf47O95873 294 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 GSNP06396 782 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 FEN1P39748 380 aaKnown RBP22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 PCBP4P57723 403 aaKnown RBP22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 DCAF12Q5T6F0 453 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 DLEU7Q6UYE1 221 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 PACS2Q86VP3 889 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 ADAMTS18Q8TE60 1221 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 TBC1D20Q96BZ9 403 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 ROPN1LQ96C74 230 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 PANX1Q96RD7 426 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 ULBP3Q9BZM4 244 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 C1orf21Q9H246 121 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 SLC22A11Q9NSA0 550 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 GID8Q9NWU2 228 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 BTNL2Q9UIR0 455 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 PSME2Q9UL46 239 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 ENTPD4Q9Y227 616 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 B3GALT1Q9Y5Z6 326 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 FER1L5A0AVI2 2057 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 A0A1W2PRB8 838 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 A8MUI8 341 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 PLD2O14939 933 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 FGF17O60258 216 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 ABCB1P08183 1280 aaPredicted RBP22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 RAB15P59190 212 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 FOLH1Q04609 750 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 DUSP2Q05923 314 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 ABHD18Q0P651 414 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 TARDBPQ13148 414 aaKnown RBP eCLIP22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 GTDC1Q4AE62 458 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 NKAIN1Q4KMZ8 207 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 C3orf38Q5JPI3 329 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 CEACAM20Q6UY09 585 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 MARCH9Q86YJ5 346 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 DEFB107AQ8IZN7 70 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 OR4A15Q8NGL6 344 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 LRRC58Q96CX6 371 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 BBS4Q96RK4 519 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 PAIP1Q9H074 479 aaKnown RBP22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 PRDM9Q9NQV7 894 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 ZNF780BQ9Y6R6 833 aa22.62■■□□□ 1.21
ATPAF1-213ENST00000574428 CROCCQ5TZA2 2017 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 A0A096LPI6 279 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 OR2W5A6NFC9 320 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 FHP07954 510 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 NTSP30990 170 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 PTGER1P34995 402 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 RORAP35398 523 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 EIF3IQ13347 325 aaKnown RBP22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 ZNF385CQ66K41 422 aaPredicted RBP22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 HACD2Q6Y1H2 254 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 COX15Q7KZN9 410 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 ZNF551Q7Z340 670 aaPredicted RBP22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 OR4K14Q8NGD5 310 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 TANKQ92844 425 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 ZNF681Q96N22 645 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 TRIM8Q9BZR9 551 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 GIMAP4Q9NUV9 329 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 CTSFQ9UBX1 484 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 CROTQ9UKG9 612 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 SATB2Q9UPW6 733 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 MRPS33Q9Y291 106 aaKnown RBP22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 SCN2AQ99250 2005 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 MYOCOSA0A1B0GUC4 107 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 GSC2O15499 205 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 KCNK5O95279 499 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 FRKP42685 505 aaPredicted RBP22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 MANFP55145 182 aaKnown RBP22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 HBA1P69905 142 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 HSPB3Q12988 150 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 C16orf89Q6UX73 402 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 NATD1Q8N6N6 113 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 ZBED6CLQ96FA7 236 aaPredicted RBP22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 AMDHD1Q96NU7 426 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 TAAR9Q96RI9 348 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 VAPAQ9P0L0 249 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 NEUROG3Q9Y4Z2 214 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 PCDHGA7Q9Y5G6 932 aa22.61■■□□□ 1.21
ATPAF1-213ENST00000574428 CEP250Q9BV73 2442 aa22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 MYO1GB0I1T2 1018 aa22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 PTPN6P29350 595 aa22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 XKP51811 444 aa22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 NCBP2P52298 156 aaKnown RBP eCLIP22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 PSME3P61289 254 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms