RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 MOAP1Q96BY2 351 aa27.51■■□□□ 1.99
CTDNEP1-208ENST00000573600 CNRIP1Q96F85 164 aaPredicted RBP27.51■■□□□ 1.99
CTDNEP1-208ENST00000573600 FAM60AQ9NP50 221 aa27.51■■□□□ 1.99
CTDNEP1-208ENST00000573600 SUSD2Q9UGT4 822 aa27.51■■□□□ 1.99
CTDNEP1-208ENST00000573600 ZNF639Q9UID6 485 aa27.51■■□□□ 1.99
CTDNEP1-208ENST00000573600 CACNA1IQ9P0X4 2223 aa27.51■■□□□ 1.99
CTDNEP1-208ENST00000573600 SRPX2O60687 465 aaPredicted RBP27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 MAGEA2P43356 314 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 MAGEA8P43361 318 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 RXRGP48443 463 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 ARRB1P49407 418 aaPredicted RBP27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 CDK6Q00534 326 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 RUNX2Q13950 521 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 CCDC80Q76M96 950 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 CBR4Q8N4T8 237 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 SFXN5Q8TD22 340 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 GAB3Q8WWW8 586 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 KLHL6Q8WZ60 621 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 MAP3K3Q99759 626 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 TMEM121BQ9BXQ6 578 aaPredicted RBP27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 THUMPD1Q9NXG2 353 aaKnown RBP27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 EPHA6Q9UF33 1036 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 AP4B1Q9Y6B7 739 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 SPACA6W5XKT8 324 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 SCN3AQ9NY46 2000 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 WASHC1A8K0Z3 465 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 ACOX3O15254 700 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 RASAL1O95294 804 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 PPM1FP49593 454 aaPredicted RBP27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 EEF1A2Q05639 463 aaKnown RBP27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 OR52E8Q6IFG1 317 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 BHLHB9Q6PI77 547 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 CEACAM20Q6UY09 585 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 MCATQ8IVS2 390 aaKnown RBP27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 DNAJC22Q8N4W6 341 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 ARL10Q8N8L6 244 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 SUN3Q8TAQ9 357 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 ELF4Q99607 663 aaPredicted RBP27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 OSBPL11Q9BXB4 747 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 NTN4Q9HB63 628 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 ANGPT4Q9Y264 503 aa27.5■■□□□ 1.99
CTDNEP1-208ENST00000573600 TNRC6BQ9UPQ9 1833 aaKnown RBP27.49■■□□□ 1.99
CTDNEP1-208ENST00000573600 ZNF23P17027 643 aa27.49■■□□□ 1.99
CTDNEP1-208ENST00000573600 NFKBIDQ8NI38 313 aa27.49■■□□□ 1.99
CTDNEP1-208ENST00000573600 C10orf90Q96M02 699 aa27.49■■□□□ 1.99
CTDNEP1-208ENST00000573600 CD180Q99467 661 aa27.49■■□□□ 1.99
CTDNEP1-208ENST00000573600 NPLQ9BXD5 320 aaPredicted RBP27.49■■□□□ 1.99
CTDNEP1-208ENST00000573600 EPB41L1Q9H4G0 881 aa27.49■■□□□ 1.99
CTDNEP1-208ENST00000573600 LRIT1Q9P2V4 623 aa27.49■■□□□ 1.99
CTDNEP1-208ENST00000573600 AK5Q9Y6K8 562 aa27.49■■□□□ 1.99
CTDNEP1-208ENST00000573600 RNF215Q9Y6U7 377 aa27.49■■□□□ 1.99
CTDNEP1-208ENST00000573600 C7orf72A4D263 438 aa27.48■■□□□ 1.99
CTDNEP1-208ENST00000573600 TLCD2A6NGC4 264 aa27.48■■□□□ 1.99
CTDNEP1-208ENST00000573600 SUV39H1O43463 412 aa27.48■■□□□ 1.99
CTDNEP1-208ENST00000573600 NUDT21O43809 227 aaKnown RBP27.48■■□□□ 1.99
CTDNEP1-208ENST00000573600 SNRPNP63162 240 aaKnown RBP27.48■■□□□ 1.99
CTDNEP1-208ENST00000573600 BNIP3Q12983 259 aa27.48■■□□□ 1.99
CTDNEP1-208ENST00000573600 ZDHHC21Q8IVQ6 265 aa27.48■■□□□ 1.99
CTDNEP1-208ENST00000573600 ZC3H7AQ8IWR0 971 aaKnown RBP27.48■■□□□ 1.99
CTDNEP1-208ENST00000573600 CCDC116Q8IYX3 515 aa27.48■■□□□ 1.99
CTDNEP1-208ENST00000573600 SLC25A45Q8N413 288 aa27.48■■□□□ 1.99
CTDNEP1-208ENST00000573600 ZDHHC12Q96GR4 267 aa27.48■■□□□ 1.99
CTDNEP1-208ENST00000573600 ZNF681Q96N22 645 aa27.48■■□□□ 1.99
CTDNEP1-208ENST00000573600 IL1RAPQ9NPH3 570 aa27.48■■□□□ 1.99
CTDNEP1-208ENST00000573600 MRPS2Q9Y399 296 aaKnown RBP27.48■■□□□ 1.99
CTDNEP1-208ENST00000573600 UPK1AO00322 258 aa27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 GNGT2O14610 69 aa27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 GALR3O60755 368 aaPredicted RBP27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 IFNA14P01570 189 aa27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 SEMG1P04279 462 aa27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 TP53BP2Q13625 1128 aa27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 CYBRD1Q53TN4 286 aa27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 FAM92BQ6ZTR7 304 aa27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 HORMAD2Q8N7B1 307 aa27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 TMBIM1Q969X1 311 aa27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 HSH2DQ96JZ2 352 aa27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 SLC35G5Q96KT7 338 aa27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 CHRNA10Q9GZZ6 450 aa27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 A4GALTQ9NPC4 353 aa27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 PDLIM1O00151 329 aa27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 FEN1P39748 380 aaKnown RBP27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 CRB2Q5IJ48 1285 aa27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 GALNT10Q86SR1 603 aa27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 MARVELD2Q8N4S9 558 aa27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 ZCCHC3Q9NUD5 404 aaKnown RBP27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 NAALAD2Q9Y3Q0 740 aa27.47■■□□□ 1.99
CTDNEP1-208ENST00000573600 B4GALT2O60909 372 aa27.46■■□□□ 1.99
CTDNEP1-208ENST00000573600 GCM2O75603 506 aaPredicted RBP27.46■■□□□ 1.99
CTDNEP1-208ENST00000573600 C8orf89P0DMQ9 161 aa27.46■■□□□ 1.99
CTDNEP1-208ENST00000573600 ANXA11P50995 505 aaKnown RBP27.46■■□□□ 1.99
CTDNEP1-208ENST00000573600 SELENOWP63302 87 aa27.46■■□□□ 1.99
CTDNEP1-208ENST00000573600 CSTF1Q05048 431 aaKnown RBP27.46■■□□□ 1.99
CTDNEP1-208ENST00000573600 C1orf210Q8IVY1 113 aa27.46■■□□□ 1.99
CTDNEP1-208ENST00000573600 SVOPLQ8N434 492 aa27.46■■□□□ 1.99
CTDNEP1-208ENST00000573600 OR4K14Q8NGD5 310 aa27.46■■□□□ 1.99
CTDNEP1-208ENST00000573600 OR56A1Q8NGH5 318 aa27.46■■□□□ 1.99
CTDNEP1-208ENST00000573600 DOHHQ9BU89 302 aa27.46■■□□□ 1.99
CTDNEP1-208ENST00000573600 PILRBQ9UKJ0 227 aa27.46■■□□□ 1.99
CTDNEP1-208ENST00000573600 FABP3P05413 133 aa27.45■■□□□ 1.99
CTDNEP1-208ENST00000573600 AQP1P29972 269 aa27.45■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms