RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 PCDH7O60245 1069 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 CTNSO60931 367 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 SASH3O75995 380 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 MYO1DO94832 1006 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 SERPINE1P05121 402 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 SERPINA7P05543 415 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 SERPINB5P36952 375 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 WDR4P57081 412 aaKnown RBP14.79□□□□□ -0.04
CHD3-215ENST00000572750 RAE1P78406 368 aaKnown RBP14.79□□□□□ -0.04
CHD3-215ENST00000572750 ZNF33BQ06732 778 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 ACSM2AQ08AH3 577 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 STX4Q12846 297 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 C4orf17Q53FE4 359 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 SPIN4Q56A73 249 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 VWA5B1Q5TIE3 1220 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 HHATQ5VTY9 493 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 ACSM2BQ68CK6 577 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 PLAG1Q6DJT9 500 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 RIPOR1Q6ZS17 1223 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 PTRH1Q86Y79 214 aaKnown RBP14.79□□□□□ -0.04
CHD3-215ENST00000572750 OR4N5Q8IXE1 308 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 SIRT6Q8N6T7 355 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 CHTF18Q8WVB6 975 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 TWIST2Q8WVJ9 160 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 UCN3Q969E3 161 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 ANKRD9Q96BM1 317 aaPredicted RBP14.79□□□□□ -0.04
CHD3-215ENST00000572750 SMAD5Q99717 465 aaKnown RBP14.79□□□□□ -0.04
CHD3-215ENST00000572750 TUBB1Q9H4B7 451 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 ZNF552Q9H707 407 aaPredicted RBP14.79□□□□□ -0.04
CHD3-215ENST00000572750 ZNF395Q9H8N7 513 aaPredicted RBP14.79□□□□□ -0.04
CHD3-215ENST00000572750 VIPAS39Q9H9C1 493 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 ZBTB20Q9HC78 741 aaPredicted RBP14.79□□□□□ -0.04
CHD3-215ENST00000572750 SERTM1A2A2V5 107 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 BLACEA4D250 179 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 WASHC1A8K0Z3 465 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 HSPA4LO95757 839 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 IFNA16P05015 189 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 ALPPP05187 535 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 UQCRHP07919 91 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 NEFHP12036 1026 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 TLX1P31314 330 aaPredicted RBP14.78□□□□□ -0.04
CHD3-215ENST00000572750 TIA1P31483 386 aaKnown RBP eCLIP14.78□□□□□ -0.04
CHD3-215ENST00000572750 SLC26A5P58743 744 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 FOLH1Q04609 750 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 EXT1Q16394 746 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 NDUFAF5Q5TEU4 345 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 OR52E8Q6IFG1 317 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 TRIM46Q7Z4K8 759 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 DDIASQ8IXT1 998 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 KIF2BQ8N4N8 673 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 OR2T11Q8NH01 316 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 ATP6V1G3Q96LB4 118 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 PSMG3-AS1Q96PY0 264 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 SH3GL2Q99962 352 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 ALOXE3Q9BYJ1 711 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 ADAP2Q9NPF8 381 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 PTGFRNQ9P2B2 879 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 ZDHHC2Q9UIJ5 367 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 TRAF6Q9Y4K3 522 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 DNAJC15Q9Y5T4 150 aa14.78□□□□□ -0.04
CHD3-215ENST00000572750 SPTBN1Q01082 2364 aaKnown RBP14.77□□□□□ -0.04
CHD3-215ENST00000572750 UQCRHLA0A096LP55 91 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 GNG14A0A1W2PPG7 69 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 A0A1W2PS29 197 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 TMEM114B3SHH9 223 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 PIP5K1BO14986 540 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 SKAP2O75563 359 aaPredicted RBP14.77□□□□□ -0.05
CHD3-215ENST00000572750 RSL1D1O76021 490 aaKnown RBP14.77□□□□□ -0.05
CHD3-215ENST00000572750 CHEK2O96017 543 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 LINC00032P0C843 101 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 CD97P48960 835 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 AGAP7PQ5VUJ5 663 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 B3GNTL1Q67FW5 361 aaPredicted RBP14.77□□□□□ -0.05
CHD3-215ENST00000572750 FCRLBQ6BAA4 426 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 LINC00696Q6ZRV3 163 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 GOLGA6L1Q8N7Z2 621 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 CDC26Q8NHZ8 85 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 PSMF1Q92530 271 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 TANKQ92844 425 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 AGAP4Q96P64 663 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 C20orf27Q9GZN8 174 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 WDR41Q9HAD4 459 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 MMP25Q9NPA2 562 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 NKIRAS1Q9NYS0 192 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 C5AR2Q9P296 337 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 MCM8Q9UJA3 840 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 ZNF451Q9Y4E5 1061 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 CCL27Q9Y4X3 112 aa14.77□□□□□ -0.05
CHD3-215ENST00000572750 POLR3HQ9Y535 204 aaPredicted RBP14.77□□□□□ -0.05
CHD3-215ENST00000572750 PRRC2CQ9Y520 2896 aaKnown RBP14.77□□□□□ -0.05
CHD3-215ENST00000572750 PGRMC2O15173 223 aa14.76□□□□□ -0.05
CHD3-215ENST00000572750 FGF4P08620 206 aa14.76□□□□□ -0.05
CHD3-215ENST00000572750 IL3P08700 152 aa14.76□□□□□ -0.05
CHD3-215ENST00000572750 ICAM2P13598 275 aa14.76□□□□□ -0.05
CHD3-215ENST00000572750 SOX11P35716 441 aa14.76□□□□□ -0.05
CHD3-215ENST00000572750 SLC18A1P54219 525 aa14.76□□□□□ -0.05
CHD3-215ENST00000572750 ABCE1P61221 599 aaKnown RBP14.76□□□□□ -0.05
CHD3-215ENST00000572750 IGLV3-21P80748 117 aaPredicted RBP14.76□□□□□ -0.05
CHD3-215ENST00000572750 BST1Q10588 318 aa14.76□□□□□ -0.05
CHD3-215ENST00000572750 SERTAD2Q14140 314 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms