RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 PCDHGA9Q9Y5G4 932 aaKnown RBP16.96■□□□□ 0.31
PFN1-202ENST00000572383 HMGB1P1B2RPK0 211 aaPredicted RBP16.95■□□□□ 0.3
PFN1-202ENST00000572383 SLC28A1O00337 649 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 PIP5K1BO14986 540 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 PGRMC2O15173 223 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 PCDH7O60245 1069 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 RSL1D1O76021 490 aaKnown RBP16.95■□□□□ 0.3
PFN1-202ENST00000572383 PDGFAP04085 211 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 PRR35P0CG20 571 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 GRK2P25098 689 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 BST1Q10588 318 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 STX4Q12846 297 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 MYBPC3Q14896 1274 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 BTBD16Q32M84 506 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 NDUFAF5Q5TEU4 345 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 RIPOR1Q6ZS17 1223 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 RNF165Q6ZSG1 346 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 Q6ZSR9 355 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 DDIASQ8IXT1 998 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 ZNF781Q8N8C0 355 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 TANKQ92844 425 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 TM4SF18Q96CE8 201 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 C11orf24Q96F05 449 aaPredicted RBP16.95■□□□□ 0.3
PFN1-202ENST00000572383 SORT1Q99523 831 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 EBPLQ9BY08 206 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 LHPPQ9H008 270 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 EPN3Q9H201 632 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 ZNF552Q9H707 407 aaPredicted RBP16.95■□□□□ 0.3
PFN1-202ENST00000572383 MCM8Q9UJA3 840 aa16.95■□□□□ 0.3
PFN1-202ENST00000572383 GNG14A0A1W2PPG7 69 aa16.94■□□□□ 0.3
PFN1-202ENST00000572383 RGS14O43566 566 aa16.94■□□□□ 0.3
PFN1-202ENST00000572383 SERPINA7P05543 415 aa16.94■□□□□ 0.3
PFN1-202ENST00000572383 ITGAMP11215 1152 aa16.94■□□□□ 0.3
PFN1-202ENST00000572383 ICAM2P13598 275 aa16.94■□□□□ 0.3
PFN1-202ENST00000572383 TIA1P31483 386 aaKnown RBP eCLIP16.94■□□□□ 0.3
PFN1-202ENST00000572383 SLC26A5P58743 744 aa16.94■□□□□ 0.3
PFN1-202ENST00000572383 FOLH1Q04609 750 aa16.94■□□□□ 0.3
PFN1-202ENST00000572383 PLAG1Q6DJT9 500 aa16.94■□□□□ 0.3
PFN1-202ENST00000572383 GALNT18Q6P9A2 607 aa16.94■□□□□ 0.3
PFN1-202ENST00000572383 MMP21Q8N119 569 aa16.94■□□□□ 0.3
PFN1-202ENST00000572383 TEX19Q8NA77 164 aa16.94■□□□□ 0.3
PFN1-202ENST00000572383 WDR41Q9HAD4 459 aa16.94■□□□□ 0.3
PFN1-202ENST00000572383 SIRT5Q9NXA8 310 aa16.94■□□□□ 0.3
PFN1-202ENST00000572383 G3BP2Q9UN86 482 aaKnown RBP16.94■□□□□ 0.3
PFN1-202ENST00000572383 PRRC2CQ9Y520 2896 aaKnown RBP16.94■□□□□ 0.3
PFN1-202ENST00000572383 RELNP78509 3460 aa16.93■□□□□ 0.3
PFN1-202ENST00000572383 SAGE2PA6NJ88 616 aa16.93■□□□□ 0.3
PFN1-202ENST00000572383 SKAP2O75563 359 aaPredicted RBP16.93■□□□□ 0.3
PFN1-202ENST00000572383 MYO1DO94832 1006 aa16.93■□□□□ 0.3
PFN1-202ENST00000572383 IFNA16P05015 189 aa16.93■□□□□ 0.3
PFN1-202ENST00000572383 PRPH2P23942 346 aa16.93■□□□□ 0.3
PFN1-202ENST00000572383 PGDP52209 483 aa16.93■□□□□ 0.3
PFN1-202ENST00000572383 TRA2BP62995 288 aaKnown RBP16.93■□□□□ 0.3
PFN1-202ENST00000572383 IGLV3-21P80748 117 aaPredicted RBP16.93■□□□□ 0.3
PFN1-202ENST00000572383 SERTAD2Q14140 314 aa16.93■□□□□ 0.3
PFN1-202ENST00000572383 KIAA0040Q15053 153 aa16.93■□□□□ 0.3
PFN1-202ENST00000572383 NR6A1Q15406 480 aa16.93■□□□□ 0.3
PFN1-202ENST00000572383 EXT1Q16394 746 aa16.93■□□□□ 0.3
PFN1-202ENST00000572383 IRAK1BP1Q5VVH5 260 aa16.93■□□□□ 0.3
PFN1-202ENST00000572383 OR52E8Q6IFG1 317 aa16.93■□□□□ 0.3
PFN1-202ENST00000572383 NFAM1Q8NET5 270 aaPredicted RBP16.93■□□□□ 0.3
PFN1-202ENST00000572383 DNAJB14Q8TBM8 379 aa16.93■□□□□ 0.3
PFN1-202ENST00000572383 M1APQ8TC57 530 aa16.93■□□□□ 0.3
PFN1-202ENST00000572383 BRIX1Q8TDN6 353 aaKnown RBP16.93■□□□□ 0.3
PFN1-202ENST00000572383 PSMF1Q92530 271 aa16.93■□□□□ 0.3
PFN1-202ENST00000572383 SMAD5Q99717 465 aaKnown RBP16.93■□□□□ 0.3
PFN1-202ENST00000572383 ILKAPQ9H0C8 392 aaPredicted RBP16.93■□□□□ 0.3
PFN1-202ENST00000572383 ADAP2Q9NPF8 381 aa16.93■□□□□ 0.3
PFN1-202ENST00000572383 VTI1BQ9UEU0 232 aa16.93■□□□□ 0.3
PFN1-202ENST00000572383 RAP2CQ9Y3L5 183 aa16.93■□□□□ 0.3
PFN1-202ENST00000572383 POLR3HQ9Y535 204 aaPredicted RBP16.93■□□□□ 0.3
PFN1-202ENST00000572383 PCDHGB7Q9Y5F8 929 aa16.93■□□□□ 0.3
PFN1-202ENST00000572383 RP1L1Q8IWN7 2480 aaPredicted RBP16.93■□□□□ 0.3
PFN1-202ENST00000572383 NPIPB8E9PQR5 432 aa16.92■□□□□ 0.3
PFN1-202ENST00000572383 GUCY1B2O75343 617 aa16.92■□□□□ 0.3
PFN1-202ENST00000572383 SEC22BO75396 215 aa16.92■□□□□ 0.3
PFN1-202ENST00000572383 GPR75O95800 540 aa16.92■□□□□ 0.3
PFN1-202ENST00000572383 ANXA4P09525 319 aaPredicted RBP16.92■□□□□ 0.3
PFN1-202ENST00000572383 TAS2R50P59544 299 aa16.92■□□□□ 0.3
PFN1-202ENST00000572383 ELAVL1Q15717 326 aaKnown RBP16.92■□□□□ 0.3
PFN1-202ENST00000572383 VWA5B1Q5TIE3 1220 aa16.92■□□□□ 0.3
PFN1-202ENST00000572383 NOXRED1Q6NXP6 359 aa16.92■□□□□ 0.3
PFN1-202ENST00000572383 HOMEZQ8IX15 550 aa16.92■□□□□ 0.3
PFN1-202ENST00000572383 SIRT6Q8N6T7 355 aa16.92■□□□□ 0.3
PFN1-202ENST00000572383 C16orf78Q8WTQ4 265 aa16.92■□□□□ 0.3
PFN1-202ENST00000572383 PPWD1Q96BP3 646 aaKnown RBP16.92■□□□□ 0.3
PFN1-202ENST00000572383 C3orf30Q96M34 536 aa16.92■□□□□ 0.3
PFN1-202ENST00000572383 ACBD3Q9H3P7 528 aa16.92■□□□□ 0.3
PFN1-202ENST00000572383 LRTM1Q9HBL6 345 aa16.92■□□□□ 0.3
PFN1-202ENST00000572383 ZBTB20Q9HC78 741 aaPredicted RBP16.92■□□□□ 0.3
PFN1-202ENST00000572383 MMP25Q9NPA2 562 aa16.92■□□□□ 0.3
PFN1-202ENST00000572383 C1orf109Q9NX04 203 aa16.92■□□□□ 0.3
PFN1-202ENST00000572383 C5AR2Q9P296 337 aa16.92■□□□□ 0.3
PFN1-202ENST00000572383 PTGFRNQ9P2B2 879 aa16.92■□□□□ 0.3
PFN1-202ENST00000572383 DLGAP4Q9Y2H0 992 aa16.92■□□□□ 0.3
PFN1-202ENST00000572383 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.92■□□□□ 0.3
PFN1-202ENST00000572383 PCDHA9Q9Y5H5 950 aa16.92■□□□□ 0.3
PFN1-202ENST00000572383 A0A1W2PS29 197 aa16.91■□□□□ 0.3
PFN1-202ENST00000572383 C1orf226A1L170 272 aa16.91■□□□□ 0.3
PFN1-202ENST00000572383 SYNDIG1LA6NDD5 238 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms