RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 FBXO17Q96EF6 278 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 SIPA1Q96FS4 1042 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 ST6GAL2Q96JF0 529 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 PRICKLE1Q96MT3 831 aaPredicted RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 MCEEQ96PE7 176 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 PRMT1Q99873 361 aaKnown RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 FEM1AQ9BSK4 669 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 ZYG11BQ9C0D3 744 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 LRMDAQ9H2I8 198 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 TMEM245Q9H330 911 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 MUC13Q9H3R2 512 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 ZWILCHQ9H900 591 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 EPB41L5Q9HCM4 733 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 IRAK4Q9NWZ3 460 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 MARCH4Q9P2E8 410 aaPredicted RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 XPO7Q9UIA9 1087 aaKnown RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 ERVW-1Q9UQF0 538 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 ZDBF2Q9HCK1 2354 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 HELZP42694 1942 aaKnown RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 FRYLO94915 3013 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 MYO16Q9Y6X6 1858 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 F5P12259 2224 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 IGLV3-10A0A075B6K4 115 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 FAM170AA1A519 330 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 C5orf60A6NFR6 353 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 ZSCAN5CA6NGD5 496 aaPredicted RBP3.73□□□□□ -1.81
NUP88-202ENST00000570937 LIPT2A6NK58 231 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 ANKRD66B4E2M5 251 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 WASH3PC4AMC7 463 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 ALOX15BO15296 676 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 CTSVO60911 334 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 PDE9AO76083 593 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 GYPCP04921 128 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 PRSS1P07477 247 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 H2AFZP0C0S5 128 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 FGF5P12034 268 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 GABRG2P18507 467 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 CHMP24386 653 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 ACADLP28330 430 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 PCK1P35558 622 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 DCTP40126 519 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 P2RY2P41231 377 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 HCAR3P49019 387 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 DHPSP49366 369 aaPredicted RBP3.73□□□□□ -1.81
NUP88-202ENST00000570937 TPMTP51580 245 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 ATXN3P54252 364 aaPredicted RBP3.73□□□□□ -1.81
NUP88-202ENST00000570937 MLLT10P55197 1068 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 YBEYP58557 167 aaPredicted RBP3.73□□□□□ -1.81
NUP88-202ENST00000570937 TPI1P60174 286 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 CREB5Q02930 508 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 CDC16Q13042 620 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 ELAVL3Q14576 367 aaKnown RBP3.73□□□□□ -1.81
NUP88-202ENST00000570937 LPAL2Q16609 132 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 HADHQ16836 314 aaKnown RBP3.73□□□□□ -1.81
NUP88-202ENST00000570937 C15orf59Q2T9L4 293 aaPredicted RBP3.73□□□□□ -1.81
NUP88-202ENST00000570937 HNRNPA1L2Q32P51 320 aaKnown RBP3.73□□□□□ -1.81
NUP88-202ENST00000570937 PCGF3Q3KNV8 242 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 PARP15Q460N3 678 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 FUT11Q495W5 492 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 ODF2Q5BJF6 829 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 ERMARDQ5T6L9 678 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 LYSMD4Q5XG99 296 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 ZNF776Q68DI1 518 aaPredicted RBP3.73□□□□□ -1.81
NUP88-202ENST00000570937 H2AFVQ71UI9 128 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 ASCL5Q7RTU5 278 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 BNIPLQ7Z465 357 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 KBTBD6Q86V97 674 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 VSTM4Q8IW00 320 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 PM20D2Q8IYS1 436 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 CCDC170Q8IYT3 715 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 GCSAMQ8N6F7 178 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 DCAF4L2Q8NA75 395 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 JOSD2Q8TAC2 188 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 OLIG1Q8TAK6 271 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 CTNNBL1Q8WYA6 563 aaPredicted RBP3.73□□□□□ -1.81
NUP88-202ENST00000570937 OR8D1Q8WZ84 308 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 PHF21AQ96BD5 680 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 SKA1Q96BD8 255 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 TBC1D31Q96DN5 1066 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 PPP1R16AQ96I34 528 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 OMDQ99983 421 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 SYT11Q9BT88 431 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 NUSAP1Q9BXS6 441 aaKnown RBP3.73□□□□□ -1.81
NUP88-202ENST00000570937 RSPH9Q9H1X1 276 aaPredicted RBP3.73□□□□□ -1.81
NUP88-202ENST00000570937 SGK2Q9HBY8 427 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 ZDHHC4Q9NPG8 344 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 PRSS16Q9NQE7 514 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 DYRK4Q9NR20 520 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 HAUS2Q9NVX0 235 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 C2orf42Q9NWW7 574 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 UVRAGQ9P2Y5 699 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 CLEC4EQ9ULY5 219 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 FAF1Q9UNN5 650 aaPredicted RBP3.73□□□□□ -1.81
NUP88-202ENST00000570937 HS3ST2Q9Y278 367 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 ZNF318Q5VUA4 2279 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 KIF26AQ9ULI4 1882 aaPredicted RBP3.73□□□□□ -1.81
NUP88-202ENST00000570937 COL4A2P08572 1712 aa3.73□□□□□ -1.81
NUP88-202ENST00000570937 A0A087X0M5 115 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 A0A087X0T9 212 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 A0A1B0GX30 115 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms