RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 SEMA3BQ13214 749 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 EIF4EBP2Q13542 120 aaPredicted RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 TP53BP2Q13625 1128 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 ENPP2Q13822 863 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 TFDP2Q14188 446 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 RCAN2Q14206 197 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 KCNJ11Q14654 390 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 RAB39AQ14964 217 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 NR1D2Q14995 579 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 GPR19Q15760 415 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 RAB11BQ15907 218 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 PSMD5Q16401 504 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 SLC5A12Q1EHB4 618 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 MANEAQ5SRI9 462 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 SPOUT1Q5T280 376 aaKnown RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 NCR3LG1Q68D85 454 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 ANKS6Q68DC2 871 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 NADSYN1Q6IA69 706 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 TMEM88Q6PEY1 159 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 SPATA31D4Q6ZUB0 917 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 C3orf62Q6ZUJ4 267 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 RRM2BQ7LG56 351 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 OTOP2Q7RTS6 562 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 GDF7Q7Z4P5 450 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 PRSS42Q7Z5A4 293 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 ABI3BPQ7Z7G0 1075 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 CENPVQ7Z7K6 275 aaPredicted RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 CIR1Q86X95 450 aaPredicted RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 PPP1R3BQ86XI6 285 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 VRK2Q86Y07 508 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 PLD3Q8IV08 490 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 C1orf210Q8IVY1 113 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 MRPL41Q8IXM3 137 aaKnown RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 DCP1BQ8IZD4 617 aaKnown RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 SELENOHQ8IZQ5 122 aaKnown RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 LILRA2Q8N149 483 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 SLC39A11Q8N1S5 342 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 C17orf78Q8N4C9 275 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 ZBTB2Q8N680 514 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 COLGALT1Q8NBJ5 622 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 CCDC197Q8NCU1 140 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 OR13C9Q8NGT0 318 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 C9orf43Q8TAL5 461 aaPredicted RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 HMGB4Q8WW32 186 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 SLC44A1Q8WWI5 657 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 OIT3Q8WWZ8 545 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 ROBO4Q8WZ75 1007 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 FIG4Q92562 907 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 RAB24Q969Q5 203 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 ZNF689Q96CS4 500 aaPredicted RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 ITPKCQ96DU7 683 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 NUDT11Q96G61 164 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 ZNF419Q96HQ0 510 aaPredicted RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 IGSF21Q96ID5 467 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 CELF6Q96J87 481 aaKnown RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 TOX2Q96NM4 488 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 OLFM3Q96PB7 478 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 QKIQ96PU8 341 aaKnown RBP eCLIP3.39□□□□□ -1.872e-6■■■■□ 23.5
SMG6-208ENST00000570874 PANX1Q96RD7 426 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 TAAR6Q96RI8 345 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 LGMNQ99538 433 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 DHRS9Q9BPW9 319 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 CLSTN3Q9BQT9 956 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 PELOQ9BRX2 385 aaKnown RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 ZNF670Q9BS34 389 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 MCMBPQ9BTE3 642 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 ALG12Q9BV10 488 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 DGCR6LQ9BY27 220 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 WNT10AQ9GZT5 417 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 SIK2Q9H0K1 926 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 PRDM12Q9H4Q4 367 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 SYNPO2LQ9H987 977 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 ZNF334Q9HCZ1 680 aaPredicted RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 DIABLOQ9NR28 239 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 TREX1Q9NSU2 369 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 TXLNGQ9NUQ3 528 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 PCMTD2Q9NV79 361 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 CLEC5AQ9NY25 188 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 HAO2Q9NYQ3 351 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 OR6C3Q9NZP0 311 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 PTGFRNQ9P2B2 879 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 SLC17A6Q9P2U8 582 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 HEY2Q9UBP5 337 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 CLEC2DQ9UHP7 191 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 SLC12A6Q9UHW9 1150 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 TMEFF2Q9UIK5 374 aaPredicted RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 NAGKQ9UJ70 344 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 FBXW11Q9UKB1 542 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 RPH3ALQ9UNE2 315 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 SNX7Q9UNH6 387 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 PKP3Q9Y446 797 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 ACTL7BQ9Y614 415 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 ACTL7AQ9Y615 435 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 FANCMQ8IYD8 2048 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 CCDC88CQ9P219 2028 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 SF3B1O75533 1304 aaKnown RBP eCLIP3.39□□□□□ -1.875e-6■■■■■ 39
SMG6-208ENST00000570874 SNRNP200O75643 2136 aaKnown RBP3.38□□□□□ -1.87
SMG6-208ENST00000570874 CKAP5Q14008 2032 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 SCN2AQ99250 2005 aa3.38□□□□□ -1.87
SMG6-208ENST00000570874 TRPM6Q9BX84 2022 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms