RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 STAG3L4Q8TBR4 150 aa13.66□□□□□ -0.22
NDE1-203ENST00000570727 EXT2Q93063 718 aa13.66□□□□□ -0.22
NDE1-203ENST00000570727 PPWD1Q96BP3 646 aaKnown RBP13.66□□□□□ -0.22
NDE1-203ENST00000570727 ATOH8Q96SQ7 321 aa13.66□□□□□ -0.22
NDE1-203ENST00000570727 SORBS1Q9BX66 1292 aaKnown RBP13.66□□□□□ -0.22
NDE1-203ENST00000570727 OR51B5Q9H339 312 aa13.66□□□□□ -0.22
NDE1-203ENST00000570727 SH2D2AQ9NP31 389 aa13.66□□□□□ -0.22
NDE1-203ENST00000570727 SACM1LQ9NTJ5 587 aa13.66□□□□□ -0.22
NDE1-203ENST00000570727 TUBA8Q9NY65 449 aaPredicted RBP13.66□□□□□ -0.22
NDE1-203ENST00000570727 TNFRSF10DQ9UBN6 386 aa13.66□□□□□ -0.22
NDE1-203ENST00000570727 OR14I1A6ND48 311 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 UBXN8O00124 270 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 HRKO00198 91 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 BCKDKO14874 412 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 NADKO95544 446 aaPredicted RBP13.65□□□□□ -0.22
NDE1-203ENST00000570727 S100BP04271 92 aaPredicted RBP13.65□□□□□ -0.22
NDE1-203ENST00000570727 IGKV3-11P04433 115 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 HOXD4P09016 255 aaPredicted RBP13.65□□□□□ -0.22
NDE1-203ENST00000570727 GSTA2P09210 222 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 SLC35E2BP0CK96 405 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 PCNAP12004 261 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 MTHFD2P13995 350 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 CPN2P22792 545 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 ACVR2AP27037 513 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 SPRP35270 261 aaPredicted RBP13.65□□□□□ -0.22
NDE1-203ENST00000570727 STT3AP46977 705 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 RIPPLY3P57055 190 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 ASPHQ12797 758 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 CALCOCO2Q13137 446 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 SLAMF1Q13291 335 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 KHDRBS2Q5VWX1 349 aaKnown RBP13.65□□□□□ -0.22
NDE1-203ENST00000570727 C18orf63Q68DL7 685 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 OR4C11Q6IEV9 310 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 ZNF585AQ6P3V2 769 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 ADGRD1Q6QNK2 874 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 LYPD8Q6UX82 237 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 FAM47EQ6ZV65 393 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 CMC1Q7Z7K0 106 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 OR5M3Q8NGP4 307 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 UBE2E3Q969T4 207 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 CMTM7Q96FZ5 175 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 SMC6Q96SB8 1091 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 TTYH2Q9BSA4 534 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 PHACTR1Q9C0D0 580 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 IGSF5Q9NSI5 407 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 NUDT4Q9NZJ9 180 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 ATG4BQ9Y4P1 393 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 FAM215AQ9Y5M1 114 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 NF1P21359 2839 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 ARHGAP21Q5T5U3 1957 aa13.65□□□□□ -0.22
NDE1-203ENST00000570727 ITPR3Q14573 2671 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 ATP6AP2A0A1C7CYW4 349 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 WASHC1A8K0Z3 465 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 FOXO6A8MYZ6 492 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 K7EPI3 171 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 AQP7O14520 342 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 RAD51CO43502 376 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 SUSD5O60279 629 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 ATP6AP2O75787 350 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 P04436 131 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 GLI4P10075 376 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 PIGAP37287 484 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 SSR2P43308 183 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 SLC10A1Q14973 349 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 KBTBD12Q3ZCT8 623 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 GRHL2Q6ISB3 625 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 LIX1LQ8IVB5 337 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 CTAGE3PQ8IX95 158 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 C9orf40Q8IXQ3 194 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 PPM1NQ8N819 430 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 C7orf57Q8NEG2 295 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 SPATA4Q8NEY3 305 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 NUBPLQ8TB37 319 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 DOK4Q8TEW6 326 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 UBTD2Q8WUN7 234 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 DGAT2Q96PD7 388 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 RPF2Q9H7B2 306 aaKnown RBP13.64□□□□□ -0.23
NDE1-203ENST00000570727 NMRAL1Q9HBL8 299 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 PROK2Q9HC23 129 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 OPTCQ9UBM4 332 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 COPS7AQ9UBW8 275 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 SPACA6W5XKT8 324 aa13.64□□□□□ -0.23
NDE1-203ENST00000570727 ZNF469Q96JG9 3925 aaPredicted RBP13.63□□□□□ -0.23
NDE1-203ENST00000570727 A0A0G2JNJ9 132 aa13.63□□□□□ -0.23
NDE1-203ENST00000570727 SUPT3HB4E1H0 165 aa13.63□□□□□ -0.23
NDE1-203ENST00000570727 PLPP1O14494 284 aa13.63□□□□□ -0.23
NDE1-203ENST00000570727 PROM1O43490 865 aa13.63□□□□□ -0.23
NDE1-203ENST00000570727 KLK8O60259 260 aa13.63□□□□□ -0.23
NDE1-203ENST00000570727 KERAO60938 352 aa13.63□□□□□ -0.23
NDE1-203ENST00000570727 SUPT3HO75486 399 aa13.63□□□□□ -0.23
NDE1-203ENST00000570727 PRKRAO75569 313 aaKnown RBP13.63□□□□□ -0.23
NDE1-203ENST00000570727 LTA4HP09960 611 aaKnown RBP13.63□□□□□ -0.23
NDE1-203ENST00000570727 RFPL3SP0C7P2 107 aa13.63□□□□□ -0.23
NDE1-203ENST00000570727 COX7A2P14406 83 aa13.63□□□□□ -0.23
NDE1-203ENST00000570727 ENDOUP21128 410 aaKnown RBP13.63□□□□□ -0.23
NDE1-203ENST00000570727 SERPINB1P30740 379 aa13.63□□□□□ -0.23
NDE1-203ENST00000570727 HNRNPH2P55795 449 aaKnown RBP13.63□□□□□ -0.23
NDE1-203ENST00000570727 FOLH1Q04609 750 aa13.63□□□□□ -0.23
NDE1-203ENST00000570727 BIKQ13323 160 aa13.63□□□□□ -0.23
NDE1-203ENST00000570727 TRADDQ15628 312 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms