RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 POU4F1Q01851 419 aa14.32□□□□□ -0.12
NME3-211ENST00000568561 IRF8Q02556 426 aa14.32□□□□□ -0.12
NME3-211ENST00000568561 SERTAD2Q14140 314 aa14.32□□□□□ -0.12
NME3-211ENST00000568561 SULT1C3Q6IMI6 304 aa14.32□□□□□ -0.12
NME3-211ENST00000568561 SYDE1Q6ZW31 735 aaPredicted RBP14.32□□□□□ -0.12
NME3-211ENST00000568561 OR5L2Q8NGL0 311 aa14.32□□□□□ -0.12
NME3-211ENST00000568561 SGCZQ96LD1 299 aa14.32□□□□□ -0.12
NME3-211ENST00000568561 SLC6A15Q9H2J7 730 aa14.32□□□□□ -0.12
NME3-211ENST00000568561 ZNF703Q9H7S9 590 aaPredicted RBP14.32□□□□□ -0.12
NME3-211ENST00000568561 DNAJB12Q9NXW2 375 aaKnown RBP14.32□□□□□ -0.12
NME3-211ENST00000568561 SNX24Q9Y343 169 aa14.32□□□□□ -0.12
NME3-211ENST00000568561 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.32□□□□□ -0.12
NME3-211ENST00000568561 KIAA1549Q9HCM3 1950 aa14.32□□□□□ -0.12
NME3-211ENST00000568561 TRGV5A0A0B4J1U4 118 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 SYNDIG1LA6NDD5 238 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 LRRC3CA6NJW4 275 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 E7ESA3 106 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 WDR1O75083 606 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 TGFB1P01137 390 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 S100BP04271 92 aaPredicted RBP14.31□□□□□ -0.12
NME3-211ENST00000568561 TCP1P17987 556 aaKnown RBP14.31□□□□□ -0.12
NME3-211ENST00000568561 HIST1H1TP22492 207 aaPredicted RBP14.31□□□□□ -0.12
NME3-211ENST00000568561 SSTR1P30872 391 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 RPL21P46778 160 aaKnown RBP14.31□□□□□ -0.12
NME3-211ENST00000568561 WNT3P56703 355 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 DDX39BQ13838 428 aaKnown RBP14.31□□□□□ -0.12
NME3-211ENST00000568561 SLC10A1Q14973 349 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 HYAL4Q2M3T9 481 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 WLSQ5T9L3 541 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 PDPRQ8NCN5 879 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 SARAFQ96BY9 339 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 POM121Q96HA1 1249 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 SENP5Q96HI0 755 aaPredicted RBP14.31□□□□□ -0.12
NME3-211ENST00000568561 DGAT2Q96PD7 388 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 GAL3ST4Q96RP7 486 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 KRT12Q99456 494 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 GPATCH1Q9BRR8 931 aaKnown RBP14.31□□□□□ -0.12
NME3-211ENST00000568561 TBCDQ9BTW9 1192 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 ROGDIQ9GZN7 287 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 OR51B5Q9H339 312 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 CCM2LQ9NUG4 571 aaPredicted RBP14.31□□□□□ -0.12
NME3-211ENST00000568561 NSMCE4AQ9NXX6 385 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 PTBP2Q9UKA9 531 aaKnown RBP14.31□□□□□ -0.12
NME3-211ENST00000568561 RNF112Q9ULX5 631 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 SPACA6W5XKT8 324 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 EXPH5Q8NEV8 1989 aa14.31□□□□□ -0.12
NME3-211ENST00000568561 EFCAB8A8MWE9 144 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 KDM4EB2RXH2 506 aaPredicted RBP14.3□□□□□ -0.12
NME3-211ENST00000568561 SUSD5O60279 629 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 SCELO95171 688 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 IGKV3-11P04433 115 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 COX7A2P14406 83 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 STT3AP46977 705 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 TRPC1P48995 793 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 IGLV3-21P80748 117 aaPredicted RBP14.3□□□□□ -0.12
NME3-211ENST00000568561 FOLH1Q04609 750 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 LAPTM5Q13571 262 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 HIST2H2ACQ16777 129 aaPredicted RBP14.3□□□□□ -0.12
NME3-211ENST00000568561 MPEG1Q2M385 716 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 AP5B1Q2VPB7 878 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 ZNF791Q3KP31 576 aaPredicted RBP14.3□□□□□ -0.12
NME3-211ENST00000568561 PIGGQ5H8A4 983 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 PAGE2BQ5JRK9 111 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 C18orf63Q68DL7 685 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 HIST2H2AA3Q6FI13 130 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 ARSKQ6UWY0 536 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 LYPD8Q6UX82 237 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 FAM13CQ8NE31 585 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 OR10G3Q8NGC4 313 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 SLC22A8Q8TCC7 542 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 SPACA9Q96E40 222 aaPredicted RBP14.3□□□□□ -0.12
NME3-211ENST00000568561 TSPAN17Q96FV3 270 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 JSRP1Q96MG2 331 aaPredicted RBP14.3□□□□□ -0.12
NME3-211ENST00000568561 POLDIP3Q9BY77 421 aaKnown RBP14.3□□□□□ -0.12
NME3-211ENST00000568561 PHACTR1Q9C0D0 580 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 ALG9Q9H6U8 611 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 SH2D2AQ9NP31 389 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 ZNF358Q9NW07 568 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 MPDZO75970 2070 aa14.3□□□□□ -0.12
NME3-211ENST00000568561 MED12Q93074 2177 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 WASHC1A8K0Z3 465 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 ZSCAN12O43309 604 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 CTAG2O75638 210 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 CD99P14209 185 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 STMN1P16949 149 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 UQCRC1P31930 480 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 HNRNPH2P55795 449 aaKnown RBP14.29□□□□□ -0.12
NME3-211ENST00000568561 ATP6V0D1P61421 351 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 HERVK_113P63132 956 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 ERVK-8P63133 956 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 DLG1Q12959 904 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 CEBPEQ15744 281 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 TBCCQ15814 346 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 SLC25A35Q3KQZ1 300 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 CDKL4Q5MAI5 379 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 KHDRBS2Q5VWX1 349 aaKnown RBP14.29□□□□□ -0.12
NME3-211ENST00000568561 SLC22A10Q63ZE4 541 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 SEM1Q6ZVN7 128 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 LRRC70Q7Z2Q7 622 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 CMC1Q7Z7K0 106 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms