RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 MAP4K2Q12851 820 aa16.3■□□□□ 0.2
VAC14-210ENST00000568548 NFE2L1Q14494 772 aa16.3■□□□□ 0.2
VAC14-210ENST00000568548 LINC00299Q6ZSB3 139 aa16.3■□□□□ 0.2
VAC14-210ENST00000568548 RAB43Q86YS6 212 aa16.3■□□□□ 0.2
VAC14-210ENST00000568548 SLC38A5Q8WUX1 472 aa16.3■□□□□ 0.2
VAC14-210ENST00000568548 F2RL3Q96RI0 385 aa16.3■□□□□ 0.2
VAC14-210ENST00000568548 PCYT1BQ9Y5K3 369 aaPredicted RBP16.3■□□□□ 0.2
VAC14-210ENST00000568548 SPTBN5Q9NRC6 3674 aaKnown RBP16.3■□□□□ 0.2
VAC14-210ENST00000568548 C5orf58C9J3I9 102 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 FRS3O43559 492 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 SLCO2B1O94956 709 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 GSTM1P09488 218 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 ASMTP46597 345 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 HNRNPA0Q13151 305 aaKnown RBP16.29■□□□□ 0.2
VAC14-210ENST00000568548 SPDYE7PQ495Y7 208 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 ZNF544Q6NX49 715 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 B3GLCTQ6Y288 498 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 CHCHD4Q8N4Q1 142 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 NLGN4YQ8NFZ3 816 aaPredicted RBP16.29■□□□□ 0.2
VAC14-210ENST00000568548 LILRB4Q8NHJ6 448 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 XAGE5Q8WWM1 108 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 ASB15Q8WXK1 588 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 DIRAS2Q96HU8 199 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 DYRK4Q9NR20 520 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 FKBP14Q9NWM8 211 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 CFL2Q9Y281 166 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 TRAV19A0A0A6YYK7 116 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 PIPSLA2A3N6 862 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 SMLR1H3BR10 107 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 ZNF197O14709 1029 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 CH25HO95992 272 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 TIMP1P01033 207 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 MAPK8P45983 427 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 RNF144AP50876 292 aaPredicted RBP16.29■□□□□ 0.2
VAC14-210ENST00000568548 SPHARQ15513 63 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 RNF165Q6ZSG1 346 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 CCDC190Q86UF4 302 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 DENND6BQ8NEG7 585 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 OR52N2Q8NGI0 321 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 LYSMD1Q96S90 227 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 PLCXD1Q9NUJ7 323 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 SLC25A13Q9UJS0 675 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 MKLN1Q9UL63 735 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 TMEM98Q9Y2Y6 226 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 GPSM3Q9Y4H4 160 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 PLXND1Q9Y4D7 1925 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 NCR1O76036 304 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 ARHGEF15O94989 841 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 SEMA3DO95025 777 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 MPC1LP0DKB6 136 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 PSMB5P28074 263 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 CD79BP40259 229 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 ZNF79Q15937 498 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 PYDC2Q56P42 97 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 CLEC12AQ5QGZ9 265 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 ZNF697Q5TEC3 545 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 TRIM40Q6P9F5 258 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 TUBA3EQ6PEY2 450 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 GEMIN6Q8WXD5 167 aaKnown RBP16.29■□□□□ 0.2
VAC14-210ENST00000568548 GATAD2BQ8WXI9 593 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 OTULINQ96BN8 352 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 GFM1Q96RP9 751 aaKnown RBP16.29■□□□□ 0.2
VAC14-210ENST00000568548 TAAR2Q9P1P5 351 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 WNT6Q9Y6F9 365 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 ENPP4Q9Y6X5 453 aa16.29■□□□□ 0.2
VAC14-210ENST00000568548 HELZP42694 1942 aaKnown RBP16.28■□□□□ 0.2
VAC14-210ENST00000568548 LTBP2Q14767 1821 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 MEIOCA2RUB1 952 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 RNASET2O00584 256 aaKnown RBP16.28■□□□□ 0.2
VAC14-210ENST00000568548 PRMT3O60678 531 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 CPNE3O75131 537 aaKnown RBP16.28■□□□□ 0.2
VAC14-210ENST00000568548 TIMP2P16035 220 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 CBLP22681 906 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 CXCR2P25025 360 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 MANFP55145 182 aaKnown RBP16.28■□□□□ 0.2
VAC14-210ENST00000568548 CSNK2BP67870 215 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 ZNF284Q2VY69 593 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 METTL2BQ6P1Q9 378 aaKnown RBP16.28■□□□□ 0.2
VAC14-210ENST00000568548 AMER3Q8N944 861 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 ASCC1Q8N9N2 400 aaKnown RBP16.28■□□□□ 0.2
VAC14-210ENST00000568548 GPR32P1Q8NGA4 272 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 ARSGQ96EG1 525 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 TMEM19Q96HH6 336 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 COMMD3Q9UBI1 195 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 CLCA3PQ9Y6N3 262 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 A0A1B0GVC2 190 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 A6NIN4 97 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 TGM5O43548 720 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 PSIP1O75475 530 aaKnown RBP16.28■□□□□ 0.2
VAC14-210ENST00000568548 IL7P13232 177 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 PTPN5P54829 565 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 DSTNP60981 165 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 OLR1P78380 273 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 SYPL1Q16563 259 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 LY6G5CQ5SRR4 150 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 TYW3Q6IPR3 259 aaKnown RBP16.28■□□□□ 0.2
VAC14-210ENST00000568548 USP30Q70CQ3 517 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 UBQLNLQ8IYU4 475 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 C1GALT1C1Q96EU7 318 aa16.28■□□□□ 0.2
VAC14-210ENST00000568548 FCRL1Q96LA6 429 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms