RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 FER1L6Q2WGJ9 1857 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 COL11A2P13942 1736 aaPredicted RBP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 AGAP5A6NIR3 686 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 NRP1O14786 923 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 CDC40O60508 579 aaKnown RBP eCLIP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 TGFB1P01137 390 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 ALPPL2P10696 532 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 CDK4P11802 303 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 CSF2RAP15509 400 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 CCKBRP32239 447 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 GLP1RP43220 463 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 PSMD8P48556 350 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 NUDT6P53370 316 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 PLA2G16P53816 162 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 RAB5BP61020 215 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 RPS24P62847 133 aaKnown RBP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 GRSF1Q12849 480 aaKnown RBP eCLIP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 CDK5R2Q13319 367 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 PUM1Q14671 1186 aaKnown RBP eCLIP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 PPP1R3AQ16821 1122 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 FAM214AQ32MH5 1076 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 C1orf189Q5VU69 101 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 METTL11BQ5VVY1 283 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 SMARCD3Q6STE5 483 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 HFE2Q6ZVN8 426 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 DCP2Q8IU60 420 aaKnown RBP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 SIAH1Q8IUQ4 282 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 LACC1Q8IV20 430 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 CEP97Q8IW35 865 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 ADGRG5Q8IZF4 528 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 CLIP4Q8N3C7 705 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 YIPF7Q8N8F6 280 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 ZNF615Q8N8J6 731 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 GALNT6Q8NCL4 622 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 PROKR2Q8NFJ6 384 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 OR2L5Q8NG80 312 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 JPH3Q8WXH2 748 aaPredicted RBP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 ZNF486Q96H40 463 aaPredicted RBP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 RNF121Q9H920 327 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 SFXN1Q9H9B4 322 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 FANCFQ9NPI8 374 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 CLEC4AQ9UMR7 237 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 KCNIP3Q9Y2W7 256 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 N6AMT1Q9Y5N5 214 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 FXYD6-FXYD2A0A087WZ82 144 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 LOC285095A0A1B0GVY8 99 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 OR5K4A6NMS3 321 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 SCDO00767 359 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 PCDH17O14917 1159 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 NPC1O15118 1278 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 SCAMP2O15127 329 aaKnown RBP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 ERI3O43414 337 aaKnown RBP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 POP7O75817 140 aaKnown RBP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 C6orf47O95873 294 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 IL1AP01583 271 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 UCHL1P09936 223 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 JUNBP17275 347 aaPredicted RBP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 NDUFV2P19404 249 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 OXTRP30559 389 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 MTNR1AP48039 350 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 PITPNBP48739 271 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 OR4D2P58180 307 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 RPS13P62277 151 aaKnown RBP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 TRA2BP62995 288 aaKnown RBP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 RAB40BQ12829 278 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 CCINQ13939 588 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 GRB7Q14451 532 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 INAVAQ3KP66 663 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 NKAPLQ5M9Q1 402 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 LARP4Q71RC2 724 aaKnown RBP eCLIP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 AMIGO1Q86WK6 493 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 C12orf40Q86WS4 652 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 SLC15A4Q8N697 577 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 KREMEN2Q8NCW0 462 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 SIMC1Q8NDZ2 872 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 KIAA1143Q96AT1 154 aaPredicted RBP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 TESCQ96BS2 214 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 SIPA1Q96FS4 1042 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 SNX18Q96RF0 628 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 NELL2Q99435 816 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 SORT1Q99523 831 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 NTMT1Q9BV86 223 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 SLC12A9Q9BXP2 914 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 ZNF717Q9BY31 904 aaPredicted RBP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 FXYD6Q9H0Q3 95 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 PELI2Q9HAT8 420 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 ADAP2Q9NPF8 381 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 IGSF5Q9NSI5 407 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 ABCB8Q9NUT2 735 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 RNF19AQ9NV58 838 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 EBF1Q9UH73 591 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 INTS6Q9UL03 887 aaKnown RBP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 NOP16Q9Y3C1 178 aaKnown RBP4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 KLK4Q9Y5K2 254 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 DLEC1Q9Y238 1755 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 KIF13BQ9NQT8 1826 aa4.17□□□□□ -1.74
LPCAT2-208ENST00000566915 DNAJC25-GNG10A0A024R161 153 aa4.16□□□□□ -1.74
LPCAT2-208ENST00000566915 CPSF4LA6NMK7 179 aaKnown RBP4.16□□□□□ -1.74
LPCAT2-208ENST00000566915 RNASET2O00584 256 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms