RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 SLC35E2BP0CK96 405 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 PCNAP12004 261 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 EPB42P16452 691 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 NAB1Q13506 487 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 ZNF791Q3KP31 576 aaPredicted RBP13.86□□□□□ -0.19
RNF40-209ENST00000566703 KBTBD12Q3ZCT8 623 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 LIPJQ5W064 366 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 SLC22A10Q63ZE4 541 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 GRHL2Q6ISB3 625 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 SPNS3Q6ZMD2 512 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 FAM47EQ6ZV65 393 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 GPR180Q86V85 440 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 ZCCHC7Q8N3Z6 543 aaKnown RBP13.86□□□□□ -0.19
RNF40-209ENST00000566703 OR5M3Q8NGP4 307 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 RHEBL1Q8TAI7 183 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 SLC22A8Q8TCC7 542 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 PELOQ9BRX2 385 aaKnown RBP13.86□□□□□ -0.19
RNF40-209ENST00000566703 TTYH2Q9BSA4 534 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 UCK2Q9BZX2 261 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 RPF2Q9H7B2 306 aaKnown RBP13.86□□□□□ -0.19
RNF40-209ENST00000566703 PRM3Q9NNZ6 103 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 SH2D2AQ9NP31 389 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 NPDC1Q9NQX5 325 aaPredicted RBP13.86□□□□□ -0.19
RNF40-209ENST00000566703 PNPLA3Q9NST1 481 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 PSD3Q9NYI0 1048 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 GRHL1Q9NZI5 618 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 TNFRSF10DQ9UBN6 386 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 KCNN3Q9UGI6 736 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 PHF11Q9UIL8 331 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 ATG4BQ9Y4P1 393 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 PCDHGA11Q9Y5H2 935 aa13.86□□□□□ -0.19
RNF40-209ENST00000566703 CACNA1CQ13936 2221 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 A0A0G2JMM0 328 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 A0A1W2PPB8 328 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 A0A1W2PRS3 328 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 SYCE1LA8MT33 242 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 KIR3DP1A8MWS1 328 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 FAM47E-STBD1D6RA91 191 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 FGF17O60258 216 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 ZNF354AO60765 605 aaPredicted RBP13.85□□□□□ -0.19
RNF40-209ENST00000566703 WDR1O75083 606 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 PTX3P26022 381 aaPredicted RBP13.85□□□□□ -0.19
RNF40-209ENST00000566703 MSX1P28360 303 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 GALNSP34059 522 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 MAGEA5P43359 124 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 MAN2A2P49641 1150 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 NR0B1P51843 470 aaKnown RBP13.85□□□□□ -0.19
RNF40-209ENST00000566703 PLIN5Q00G26 463 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 ASPHQ12797 758 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 DLG1Q12959 904 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 B3GNT6Q6ZMB0 384 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 CDH24Q86UP0 819 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 CCDC71Q8IV32 467 aaPredicted RBP13.85□□□□□ -0.19
RNF40-209ENST00000566703 CLYBLQ8N0X4 340 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 RPRMLQ8N4K4 120 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 PPM1NQ8N819 430 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 MYRIPQ8NFW9 859 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 HUS1BQ8NHY5 278 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 PAQR8Q8TEZ7 354 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 EXT2Q93063 718 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 SARAFQ96BY9 339 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 FBXL20Q96IG2 436 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 OR51B5Q9H339 312 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 IGSF5Q9NSI5 407 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 CNIH4Q9P003 139 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 ACOT9Q9Y305 439 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 UTP11Q9Y3A2 253 aaKnown RBP13.85□□□□□ -0.19
RNF40-209ENST00000566703 PCDHGB3Q9Y5G1 929 aa13.85□□□□□ -0.19
RNF40-209ENST00000566703 LRBAP50851 2863 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 NKX2-6A6NCS4 301 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 FAM90A27PA6NNH2 459 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 SUPT3HB4E1H0 165 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 G3V3Y1 287 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 UBXN8O00124 270 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 RAD51CO43502 376 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 KLK8O60259 260 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 UGDHO60701 494 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 SUPT3HO75486 399 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 CCL3P10147 92 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 MTHFD2P13995 350 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 GABRA1P14867 456 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 ALOX15P16050 662 aaPredicted RBP13.84□□□□□ -0.19
RNF40-209ENST00000566703 STX2P32856 288 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 BUD31P41223 144 aaPredicted RBP13.84□□□□□ -0.19
RNF40-209ENST00000566703 MAGEA4P43358 317 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 ZFP36L2P47974 494 aaKnown RBP13.84□□□□□ -0.19
RNF40-209ENST00000566703 RAP1GDS1P52306 607 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 MRPS25P82663 173 aaKnown RBP13.84□□□□□ -0.19
RNF40-209ENST00000566703 TNFRSF17Q02223 184 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 ID2Q02363 134 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 WLSQ5T9L3 541 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 CES4AQ5XG92 561 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 METTL2BQ6P1Q9 378 aaKnown RBP13.84□□□□□ -0.19
RNF40-209ENST00000566703 ZNF585AQ6P3V2 769 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 LYPD8Q6UX82 237 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 ST13P4Q8IZP2 240 aaPredicted RBP13.84□□□□□ -0.19
RNF40-209ENST00000566703 OR5M9Q8NGP3 310 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 NXNL1Q96CM4 212 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 RAB17Q9H0T7 212 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 LDAHQ9H6V9 325 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms