RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 PLPP5Q8NEB5 264 aa7.66□□□□□ -1.18
CDH13-208ENST00000566333 OR11G2Q8NGC1 345 aa7.66□□□□□ -1.18
CDH13-208ENST00000566333 CLHC1Q8NHS4 586 aa7.66□□□□□ -1.18
CDH13-208ENST00000566333 RFWD2Q8NHY2 731 aa7.66□□□□□ -1.18
CDH13-208ENST00000566333 DNAJB14Q8TBM8 379 aa7.66□□□□□ -1.18
CDH13-208ENST00000566333 ACTRT2Q8TDY3 377 aa7.66□□□□□ -1.18
CDH13-208ENST00000566333 STON2Q8WXE9 905 aa7.66□□□□□ -1.18
CDH13-208ENST00000566333 ZNF764Q96H86 408 aaPredicted RBP7.66□□□□□ -1.18
CDH13-208ENST00000566333 TSSK3Q96PN8 268 aa7.66□□□□□ -1.18
CDH13-208ENST00000566333 RPF2Q9H7B2 306 aaKnown RBP7.66□□□□□ -1.18
CDH13-208ENST00000566333 KCNK13Q9HB14 408 aa7.66□□□□□ -1.18
CDH13-208ENST00000566333 PRDM9Q9NQV7 894 aa7.66□□□□□ -1.18
CDH13-208ENST00000566333 PRTFDC1Q9NRG1 225 aa7.66□□□□□ -1.18
CDH13-208ENST00000566333 WDR70Q9NW82 654 aa7.66□□□□□ -1.18
CDH13-208ENST00000566333 CES1P1Q9UKY3 287 aa7.66□□□□□ -1.18
CDH13-208ENST00000566333 MRPS33Q9Y291 106 aaKnown RBP7.66□□□□□ -1.18
CDH13-208ENST00000566333 PCDHA9Q9Y5H5 950 aa7.66□□□□□ -1.18
CDH13-208ENST00000566333 SMG1Q96Q15 3661 aaKnown RBP7.66□□□□□ -1.18
CDH13-208ENST00000566333 IGHV1-45A0A0A0MS14 117 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 IGHV3-20A0A0C4DH32 117 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 C1orf226A1L170 272 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 BLACEA4D250 179 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 CDC14CA4D256 554 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 MASP2O00187 686 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 ANKRD28O15084 1053 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 PRMT3O60678 531 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 VPS4BO75351 444 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 TGDSO95455 350 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 HEXBP07686 556 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 G6PDP11413 515 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 LBPP18428 481 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 DDCP20711 480 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 LSP1P33241 339 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 SOX18P35713 384 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 IDH3AP50213 366 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 AQP5P55064 265 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 UCNP55089 124 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 C21orf58P58505 322 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 EMX2Q04743 252 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 EEF1A2Q05639 463 aaKnown RBP7.65□□□□□ -1.18
CDH13-208ENST00000566333 VAC14Q08AM6 782 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 SSPNQ14714 243 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 MPEG1Q2M385 716 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 ZNF750Q32MQ0 723 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 LSM12Q3MHD2 195 aaKnown RBP7.65□□□□□ -1.18
CDH13-208ENST00000566333 ZNF385BQ569K4 471 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 MFSD4BQ5TF39 518 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 BROXQ5VW32 411 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 IL23RQ5VWK5 629 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 TMEM198Q66K66 360 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 EML6Q6ZMW3 1958 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 CCDC81Q6ZN84 652 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 LRRC69Q6ZNQ3 347 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 DGAT2L6Q6ZPD8 337 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 RAB43Q86YS6 212 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 OR4N5Q8IXE1 308 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 LIX1Q8N485 282 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 CDC26Q8NHZ8 85 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 NUDT8Q8WV74 236 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 TANKQ92844 425 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 NACC2Q96BF6 587 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 CNRIP1Q96F85 164 aaPredicted RBP7.65□□□□□ -1.18
CDH13-208ENST00000566333 THOC1Q96FV9 657 aaKnown RBP7.65□□□□□ -1.18
CDH13-208ENST00000566333 MARK4Q96L34 752 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 ZNF681Q96N22 645 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 PTCHD1Q96NR3 888 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 PHF12Q96QT6 1004 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 BRINP2Q9C0B6 783 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 NPHS2Q9NP85 383 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 SLAMF7Q9NQ25 335 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 PFDN4Q9NQP4 134 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 AIG1Q9NVV5 245 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 P4HTMQ9NXG6 502 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 NOP53Q9NZM5 478 aaKnown RBP7.65□□□□□ -1.18
CDH13-208ENST00000566333 BAIAP2L1Q9UHR4 511 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 FBXL4Q9UKA2 621 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 SPACA6W5XKT8 324 aa7.65□□□□□ -1.18
CDH13-208ENST00000566333 MYOCOSA0A1B0GUC4 107 aa7.64□□□□□ -1.19
CDH13-208ENST00000566333 SAGE2PA6NJ88 616 aa7.64□□□□□ -1.19
CDH13-208ENST00000566333 CLDN4O14493 209 aa7.64□□□□□ -1.19
CDH13-208ENST00000566333 PCDH17O14917 1159 aa7.64□□□□□ -1.19
CDH13-208ENST00000566333 SCAMP2O15127 329 aaKnown RBP7.64□□□□□ -1.19
CDH13-208ENST00000566333 TBX19O60806 448 aa7.64□□□□□ -1.19
CDH13-208ENST00000566333 DIAPH2O60879 1101 aa7.64□□□□□ -1.19
CDH13-208ENST00000566333 CTNSO60931 367 aa7.64□□□□□ -1.19
CDH13-208ENST00000566333 MYO1DO94832 1006 aa7.64□□□□□ -1.19
CDH13-208ENST00000566333 SEC24DO94855 1032 aaPredicted RBP7.64□□□□□ -1.19
CDH13-208ENST00000566333 GPR75O95800 540 aa7.64□□□□□ -1.19
CDH13-208ENST00000566333 IGHEP01854 428 aa7.64□□□□□ -1.19
CDH13-208ENST00000566333 CELA2AP08217 269 aa7.64□□□□□ -1.19
CDH13-208ENST00000566333 VIMP08670 466 aaKnown RBP7.64□□□□□ -1.19
CDH13-208ENST00000566333 DRD2P14416 443 aa7.64□□□□□ -1.19
CDH13-208ENST00000566333 MAPK1P28482 360 aa7.64□□□□□ -1.19
CDH13-208ENST00000566333 PTGER1P34995 402 aa7.64□□□□□ -1.19
CDH13-208ENST00000566333 ZFP36L2P47974 494 aaKnown RBP7.64□□□□□ -1.19
CDH13-208ENST00000566333 ALDH9A1P49189 494 aa7.64□□□□□ -1.19
CDH13-208ENST00000566333 Q0VFX4 171 aa7.64□□□□□ -1.19
CDH13-208ENST00000566333 SLC13A2Q13183 592 aa7.64□□□□□ -1.19
CDH13-208ENST00000566333 MAD2L1Q13257 205 aaPredicted RBP7.64□□□□□ -1.19
CDH13-208ENST00000566333 NSDHLQ15738 373 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms